RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 EPC1Q9H2F5 836 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 PIDD1Q9HB75 910 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 FAM217BQ9NTX9 383 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 DPP7Q9UHL4 492 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 MTF2Q9Y483 593 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 COL4A3Q01955 1670 aa19.7■□□□□ 0.74
TRAPPC3-209ENST00000616395 KANSL1LA0AUZ9 987 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 ZNF862O60290 1169 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 GLUD1P00367 558 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 OATP04181 439 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 AFF1P51825 1210 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 FUT2Q10981 343 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 AP3B2Q13367 1082 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 SNW1Q13573 536 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 TAS1R1Q7RTX1 841 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 ZBTB44Q8NCP5 570 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 TBC1D22BQ9NU19 505 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 TCEAL9Q9UHQ7 104 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 RALYQ9UKM9 306 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 TPCN1Q9ULQ1 816 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 PIN4Q9Y237 131 aaKnown RBP19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 FAN1Q9Y2M0 1017 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 SAMM50Q9Y512 469 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 ATP6V1DQ9Y5K8 247 aa19.69■□□□□ 0.74
TRAPPC3-209ENST00000616395 USP24Q9UPU5 2620 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 DDX11L8A8MPP1 907 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 ZNF623O75123 536 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 SOD2P04179 222 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 ALDH2P05091 517 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 CLK2P49760 499 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 ME3Q16798 604 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 TEX2Q8IWB9 1127 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 URGCPQ8TCY9 931 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 HERC2P3Q9BVR0 1158 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 PARD6AQ9NPB6 346 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 NRBP2Q9NSY0 501 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 RBM28Q9NW13 759 aaKnown RBP19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 ZSCAN32Q9NX65 697 aa19.68■□□□□ 0.74
TRAPPC3-209ENST00000616395 CHD8Q9HCK8 2581 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 A0A087WZ62 844 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 SMCO2A6NFE2 343 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 NRP1O14786 923 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 LILRB5O75023 590 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 PAPLNO95428 1278 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 SFPQP23246 707 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 ADD1P35611 737 aaKnown RBP19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 UBXN2BQ14CS0 331 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 PPP1R18Q6NYC8 613 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 AGMOQ6ZNB7 445 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 FAM184AQ8NB25 1140 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 GTF3C6Q969F1 213 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 FDXACB1Q9BRP7 624 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 TMEM175Q9BSA9 504 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 ANP32EQ9BTT0 268 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 DDX23Q9BUQ8 820 aaKnown RBP19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 NT5C3AQ9H0P0 336 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 DOCK8Q8NF50 2099 aa19.67■□□□□ 0.74
TRAPPC3-209ENST00000616395 FAM170BA6NMN3 283 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PFKFB2O60825 505 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 CDKL5O76039 1030 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 RAB27AP51159 221 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PRKCEQ02156 737 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 MLF2Q15773 248 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PPM1JQ5JR12 505 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PARM1Q6UWI2 310 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 CRYGNQ8WXF5 182 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 FGF14Q92915 247 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PHKBQ93100 1093 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PGBD4Q96DM1 585 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 FAM193BQ96PV7 902 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 RXFP1Q9HBX9 757 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 SSX2IPQ9Y2D8 614 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PRG3Q9Y2Y8 225 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PCDHB2Q9Y5E7 798 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 NID2Q14112 1375 aa19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 MYH9P35579 1960 aaKnown RBP19.66■□□□□ 0.74
TRAPPC3-209ENST00000616395 PATJQ8NI35 1801 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 CPLX1O14810 134 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 CYP3A4P08684 503 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 GLUD2P49448 558 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 EVCP57679 992 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 STK3Q13188 491 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 UGCGQ16739 394 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 JAKMIP3Q5VZ66 844 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 TSSK4Q6SA08 328 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 PALB2Q86YC2 1186 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 HDAC7Q8WUI4 952 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 NELL1Q92832 810 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 NCOA5Q9HCD5 579 aaKnown RBP19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 MARCH5Q9NX47 278 aa19.65■□□□□ 0.74
TRAPPC3-209ENST00000616395 MIA3Q5JRA6 1907 aa19.64■□□□□ 0.74
TRAPPC3-209ENST00000616395 WDR64B1ANS9 1081 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 TBC1D4O60343 1298 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 POMCP01189 267 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 CD72P21854 359 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 CCT2P78371 535 aaKnown RBP19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 PRKCQQ04759 706 aa19.64■□□□□ 0.73
TRAPPC3-209ENST00000616395 NBR1Q14596 966 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms