RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ATP2C1P98194 919 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 FOXF2Q12947 444 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 C21orf62-AS1Q17RA5 79 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 KRT40Q6A162 431 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 MFSD5Q6N075 450 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 UNC5BQ8IZJ1 945 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 NXPE1Q8N323 547 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 PPP1R14CQ8TAE6 165 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 RTF1Q92541 710 aaKnown RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 NOL10Q9BSC4 688 aaKnown RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 POFUT1Q9H488 388 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 IL23AQ9NPF7 189 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 H2AFY2Q9P0M6 372 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 TMA7Q9Y2S6 64 aaKnown RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 RBM8AQ9Y5S9 174 aaKnown RBP3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 HS3ST4Q9Y661 456 aa3.63□□□□□ -1.83
HMGB1P24-202ENST00000615653 C2orf78A6NCI8 922 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 GOLGA8BA8MQT2 603 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZNF185O15231 689 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TGM5O43548 720 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TOX4O94842 621 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 APOL3O95236 402 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 FKBP9O95302 570 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ABHD16AO95870 558 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ITGB1P05556 798 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 MAN2A2P49641 1150 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TAP1Q03518 808 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 PCBP1Q15365 356 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 DHCR24Q15392 516 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TERF2Q15554 542 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 SEPT7Q16181 437 aaKnown RBP3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 FKBP9P1Q75LS8 142 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 FAM177A1Q8N128 213 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 SYNE4Q8N205 404 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZNF276Q8N554 614 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ANKRD53Q8N9V6 530 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 NELL1Q92832 810 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 MIEF2Q96C03 454 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 UIMC1Q96RL1 719 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TCF25Q9BQ70 676 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 SLKQ9H2G2 1235 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 TRPS1Q9UHF7 1281 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 DNAI1Q9UI46 699 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 MSRAQ9UJ68 235 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 RCAN3Q9UKA8 241 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 APOBEC2Q9Y235 224 aaKnown RBP3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 PCDHB6Q9Y5E3 794 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 MYPNQ86TC9 1320 aa3.62□□□□□ -1.83
HMGB1P24-202ENST00000615653 ELL2O00472 640 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZEB2O60315 1214 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 PDE8AO60658 829 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 FAM20BO75063 409 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 ULK1O75385 1050 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 IPO13O94829 963 aaKnown RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 SEC24DO94855 1032 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 PFKMP08237 780 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 XPAP23025 273 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 ADCYAP1R1P41586 468 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 KIR2DL3P43628 341 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 NRG3P56975 720 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 SAFB2Q14151 953 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 FAM111BQ6SJ93 734 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 FRMD7Q6ZUT3 714 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 CXorf67Q86X51 503 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 GLB1L2Q8IW92 636 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 BEND2Q8NDZ0 799 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 USP7Q93009 1102 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 PAWRQ96IZ0 340 aaKnown RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 RPL10LQ96L21 214 aaKnown RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 GPR101Q96P66 508 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 GPHA2Q96T91 129 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 TMX1Q9H3N1 280 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 SPTLC3Q9NUV7 552 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 MAGEL2Q9UJ55 1249 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 NUMBLQ9Y6R0 609 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 XDHP47989 1333 aa3.61□□□□□ -1.83
HMGB1P24-202ENST00000615653 A0A087X0B3 334 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 KDM1AO60341 852 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZFPL1O95159 310 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 PCDH8O95206 1070 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 GAAP10253 952 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 MYCLP1P12525 358 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 HNRNPLP14866 589 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 BPIP17213 487 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 NCLP19338 710 aaKnown RBP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 NR4A1P22736 598 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 HSD3B2P26439 372 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 SOX5P35711 763 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 WNT3AP56704 352 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 MEF2AQ02078 507 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 SPIDRQ14159 915 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 DDB1Q16531 1140 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 DCAF17Q5H9S7 520 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 RABL3Q5HYI8 236 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 ZBTB41Q5SVQ8 909 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 UNQ6494/PRO21346Q6UXR6 183 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 C1QL2Q7Z5L3 287 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 APBB1IPQ7Z5R6 666 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 CMTM4Q8IZR5 234 aa3.6□□□□□ -1.83
HMGB1P24-202ENST00000615653 FAM98AQ8NCA5 519 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms