RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PLVAPQ9BX97 442 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 PDZD7Q9H5P4 517 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 PLAGL2Q9UPG8 496 aa18.44■□□□□ 0.54
CBWD3-211ENST00000615061 TDRD15B5MCY1 1934 aaKnown RBP18.44■□□□□ 0.54
CBWD3-211ENST00000615061 K7ERI5 159 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 DNAJB1P25685 340 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 TXLNAP40222 546 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 EFNA5P52803 228 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 GIT2Q14161 759 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 AXDND1Q5T1B0 1012 aaPredicted RBP18.43■□□□□ 0.54
CBWD3-211ENST00000615061 NT5DC1Q5TFE4 455 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 GLB1LQ6UWU2 654 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 COLGALT1Q8NBJ5 622 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 TRIM6Q9C030 488 aaPredicted RBP18.43■□□□□ 0.54
CBWD3-211ENST00000615061 RSAD1Q9HA92 442 aa18.43■□□□□ 0.54
CBWD3-211ENST00000615061 B4GALT3O60512 393 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 ITGA4P13612 1032 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 AKAP5P24588 427 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 CAMK1Q14012 370 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 NOMO2Q5JPE7 1267 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 P2RX5Q93086 422 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 MRPL38Q96DV4 380 aaKnown RBP18.42■□□□□ 0.54
CBWD3-211ENST00000615061 C17orf75Q9HAS0 396 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 TBC1D13Q9NVG8 400 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 PCDHA7Q9UN72 937 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 C5orf42Q9H799 3197 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 MUC3AQ02505 3323 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 KRT18P05783 430 aaKnown RBP18.42■□□□□ 0.54
CBWD3-211ENST00000615061 SPPL3Q8TCT6 385 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 KCNG4Q8TDN1 519 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 ZFP42Q96MM3 310 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 NTPCRQ9BSD7 190 aaKnown RBP18.42■□□□□ 0.54
CBWD3-211ENST00000615061 LMCD1Q9NZU5 365 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 STK17AQ9UEE5 414 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 PCDHB12Q9Y5F1 795 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 NCOR1O75376 2440 aa18.42■□□□□ 0.54
CBWD3-211ENST00000615061 PHLPP2Q6ZVD8 1323 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 NT5C1B-RDH14C9J2C7 533 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 CUTAO60888 179 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 POMCP01189 267 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 LAG3P18627 525 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 MLH1P40692 756 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 STAT6P42226 847 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ME1P48163 572 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ATF7IP2Q5U623 682 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ATL3Q6DD88 541 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 KCNT2Q6UVM3 1135 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 DYMQ7RTS9 669 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ZNF280BQ86YH2 543 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 TMEM161BQ8NDZ6 487 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 CNNM3Q8NE01 707 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 GAD1Q99259 594 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 MRPL9Q9BYD2 267 aaKnown RBP18.41■□□□□ 0.54
CBWD3-211ENST00000615061 GBP3Q9H0R5 595 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ZHX3Q9H4I2 956 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 RCOR1Q9UKL0 485 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 ODF2LQ9ULJ1 636 aa18.41■□□□□ 0.54
CBWD3-211ENST00000615061 MYMKA6NI61 221 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 N4BP3O15049 544 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 FGF18O76093 207 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 THNSL1Q8IYQ7 743 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 POF1BQ8WVV4 589 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 TARS2Q9BW92 718 aaKnown RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 NRDE2Q9H7Z3 1164 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 DNAJB4Q9UDY4 337 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 PCDHGC5Q9Y5F6 944 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 DDHD2O94830 711 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 FAM13AO94988 1023 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 IRS1P35568 1242 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 ZNF131P52739 623 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 RNASELQ05823 741 aaKnown RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 SKIV2LQ15477 1246 aaKnown RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 PTPROQ16827 1216 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 TMEM173Q86WV6 379 aaPredicted RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 MYCT1Q8N699 235 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 STAMQ92783 540 aa18.4■□□□□ 0.54
CBWD3-211ENST00000615061 LARSQ9P2J5 1176 aaKnown RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 RBM19Q9Y4C8 960 aaKnown RBP18.4■□□□□ 0.54
CBWD3-211ENST00000615061 ARL5CA6NH57 179 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 MAPTP10636 758 aaKnown RBP18.39■□□□□ 0.53
CBWD3-211ENST00000615061 SCNN1GP51170 649 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 SMTNP53814 917 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 NCKAP1LP55160 1127 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 BCAR1P56945 870 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 E2F4Q16254 413 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 GSTCDQ8NEC7 633 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 LEO1Q8WVC0 666 aaPredicted RBP18.39■□□□□ 0.53
CBWD3-211ENST00000615061 DDX12PQ92771 950 aa18.39■□□□□ 0.53
CBWD3-211ENST00000615061 ZNF558Q96NG5 402 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms