RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 RAB20Q9NX57 234 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 CA4P22748 312 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 GCKP35557 465 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 PTENP60484 403 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 CD302Q8IX05 232 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 SP8Q8IXZ3 490 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 KAT5Q92993 513 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 TUFT1Q9NNX1 390 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 INTUQ9ULD6 942 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 LRRIQ4A6NIV6 560 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 FSBPO95073 299 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 ARP10275 920 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 ZNF394Q53GI3 561 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 ANKRD20A8PQ5CZ79 823 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 FYB2Q5VWT5 728 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 LARGE2Q8N3Y3 721 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 CPA5Q8WXQ8 436 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 KIFC3Q9BVG8 833 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 GPRC5CQ9NQ84 441 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 ASTN1O14525 1302 aa13.43□□□□□ -0.26
MSH6-213ENST00000614496 PI4K2BG5E9Z4 385 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 OPLAHO14841 1288 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 ANXA13P27216 316 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 RASA3Q14644 834 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 FAM213AQ9BRX8 229 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 AJAP1Q9UKB5 411 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SGK1O00141 431 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 MMP10P09238 476 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 COILP38432 576 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 ANKRD35Q8N283 1001 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 POP1Q99575 1024 aaKnown RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 ZSWIM1Q9BR11 485 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 FAM129AQ9BZQ8 928 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 KCNMB3Q9NPA1 279 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 MEIS2O14770 477 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SCP2P22307 547 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SREBF1P36956 1147 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 PPP2R5AQ15172 486 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 ZNF720Q7Z2F6 126 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 CCDC89Q8N998 374 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SMC6Q96SB8 1091 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 FAM167BQ9BTA0 163 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 ETNK1Q9HBU6 452 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 ERVK-5Q9HDB9 667 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SPATA31C1P0DKV0 1188 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 CD58P19256 250 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 ELF1P32519 619 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 NPEPPSP55786 919 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 PLA2G4FQ68DD2 849 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 RPAINQ86UA6 219 aa13.42□□□□□ -0.26
MSH6-213ENST00000614496 SLC13A5Q86YT5 568 aaPredicted RBP13.42□□□□□ -0.26
MSH6-213ENST00000614496 MYO3BQ8WXR4 1341 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 TJP1Q07157 1748 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 CALCAP01258 141 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 PYGMP11217 842 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 ARHGEF19Q8IW93 802 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 CTAGE3PQ8IX95 158 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 CERS5Q8N5B7 392 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 PRPF38AQ8NAV1 312 aaKnown RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 ALG3Q92685 438 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 MCUR1Q96AQ8 359 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 UNC45AQ9H3U1 944 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.41□□□□□ -0.26
MSH6-213ENST00000614496 TRPM3Q9HCF6 1732 aaPredicted RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 PFASO15067 1338 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 ECE2O60344 883 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 KRT1P04264 644 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 PRKCIP41743 596 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 AOC3Q16853 763 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 EPM2AIP1Q7L775 607 aaPredicted RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 LDHDQ86WU2 507 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 PALB2Q86YC2 1186 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 USP15Q9Y4E8 981 aaPredicted RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 TMEM150BA6NC51 233 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 EIF3DO15371 548 aaKnown RBP eCLIP13.41□□□□□ -0.26
MSH6-213ENST00000614496 SLITRK3O94933 977 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 P4HBP07237 508 aaKnown RBP13.41□□□□□ -0.26
MSH6-213ENST00000614496 NPR1P16066 1061 aa13.41□□□□□ -0.26
MSH6-213ENST00000614496 DLG4P78352 724 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms