RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 TLDC1Q6P9B6 456 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 MAMDC4Q6UXC1 1216 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 RUBCNQ92622 972 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 SPATA33Q96N06 139 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 EPN3Q9H201 632 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 RNPEPQ9H4A4 650 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 ZNF302Q9NR11 478 aa10.77□□□□□ -0.68
GGA3-221ENST00000614198 TRPM7Q96QT4 1865 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 ZBTB48P10074 688 aaPredicted RBP10.77□□□□□ -0.69
GGA3-221ENST00000614198 SNCBQ16143 134 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 KNOP1Q1ED39 458 aaKnown RBP10.77□□□□□ -0.69
GGA3-221ENST00000614198 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 CCDC181Q5TID7 509 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 NAA35Q5VZE5 725 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 TAPT1Q6NXT6 567 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 GLG1Q92896 1179 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 MROH8Q9H579 483 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 IVNS1ABPQ9Y6Y0 642 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 ATP1A1P05023 1023 aaKnown RBP10.77□□□□□ -0.69
GGA3-221ENST00000614198 EDN1P05305 212 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 PSAPP07602 524 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 CLNS1AP54105 237 aaKnown RBP10.77□□□□□ -0.69
GGA3-221ENST00000614198 INHBEP58166 350 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 TBC1D8BQ0IIM8 1120 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 SF3A3Q12874 501 aaKnown RBP eCLIP10.77□□□□□ -0.693e-6■■■■□ 21.5
GGA3-221ENST00000614198 SEZ6Q53EL9 994 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 TTMPQ5BVD1 217 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 C4orf19Q8IY42 314 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 CBWD1Q9BRT8 395 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 HAUS4Q9H6D7 363 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 ABHD10Q9NUJ1 306 aa10.77□□□□□ -0.69
GGA3-221ENST00000614198 EVPLQ92817 2033 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 ACTN1P12814 892 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 EZRP15311 586 aaKnown RBP10.76□□□□□ -0.69
GGA3-221ENST00000614198 JAK3P52333 1124 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 FKBP1BP68106 108 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 DCAF17Q5H9S7 520 aaPredicted RBP10.76□□□□□ -0.69
GGA3-221ENST00000614198 EMC10Q5UCC4 262 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 SCARA3Q6AZY7 606 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 CDR2LQ86X02 465 aaPredicted RBP10.76□□□□□ -0.69
GGA3-221ENST00000614198 PARP9Q8IXQ6 854 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 ZNF507Q8TCN5 953 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 ARL8AQ96BM9 186 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 ATP6V0A4Q9HBG4 840 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 CYP26B1Q9NR63 512 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 LRRC10BA6NIK2 292 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 ANKRD63C9JTQ0 380 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 LSP1P33241 339 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 DLG4P78352 724 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 SLC7A5Q01650 507 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 CCDC62Q6P9F0 684 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 PIK3R5Q8WYR1 880 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 MAML3Q96JK9 1138 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 CHP1Q99653 195 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 GPR20Q99678 358 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 THAP9Q9H5L6 903 aa10.76□□□□□ -0.69
GGA3-221ENST00000614198 MAGEC2Q9UBF1 373 aaPredicted RBP10.76□□□□□ -0.69
GGA3-221ENST00000614198 ANKRD33BA6NCL7 494 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 ZNF185O15231 689 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 SKAP2O75563 359 aaPredicted RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 TRIM49P0CI25 452 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 TRIM49CP0CI26 452 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 NPTX2P47972 431 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 STAT5BP51692 787 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 PSMD2Q13200 908 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 ARMC3Q5W041 872 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 IQCEQ6IPM2 695 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 ZNF473Q8WTR7 871 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 JAKMIP2Q96AA8 810 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 PARK7Q99497 189 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 LRRC27Q9C0I9 530 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 ACTR5Q9H9F9 607 aaPredicted RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 REXO2Q9Y3B8 237 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 BICDL2A1A5D9 508 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 NOP56O00567 594 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 SFNP31947 248 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 SLC8A3P57103 927 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 TRIM32Q13049 653 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 ENOX2Q16206 610 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 CELF3Q5SZQ8 465 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 MIS18BP1Q6P0N0 1132 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 C6orf89Q6UWU4 347 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 FAM228AQ86W67 206 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 DNAAF5Q86Y56 855 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 AFG1LQ8WV93 481 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 SAAL1Q96ER3 474 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 SCLT1Q96NL6 688 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 EPN1Q9Y6I3 576 aaPredicted RBP10.75□□□□□ -0.69
GGA3-221ENST00000614198 GOLGA6L7A0A1B0GV03 622 aa10.75□□□□□ -0.69
GGA3-221ENST00000614198 SRRM3A6NNA2 597 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms