RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 RASGEF1CQ8N431 466 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 LRRC15Q8TF66 581 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 EEF2KMTQ96G04 330 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 SPATC1LQ9H0A9 340 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 TMEM60Q9H2L4 133 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 FDX1P10109 184 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 UNC13DQ70J99 1090 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 AGAP11Q8TF27 550 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 ATXN2LQ8WWM7 1075 aaKnown RBP23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 TSG101Q99816 390 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 TEX13BQ9BXU2 312 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 SLC5A4Q9NY91 659 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 AIPL1Q9NZN9 384 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 RABGAP1Q9Y3P9 1069 aa23.65■■□□□ 1.38
POLR2J3-220ENST00000613744 TLR2O60603 784 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 TRPA1O75762 1119 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 GNA11P29992 359 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 ADCY7P51828 1080 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 KCNMA1Q12791 1236 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 BLMHQ13867 455 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 RBBP5Q15291 538 aaKnown RBP23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 PPP2R5EQ16537 467 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 TBC1D5Q92609 795 aa23.64■■□□□ 1.38
POLR2J3-220ENST00000613744 NKRFO15226 690 aaKnown RBP eCLIP23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 MMEP08473 750 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 LRRC55Q6ZSA7 311 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 NCAPG2Q86XI2 1143 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 KIRREL3Q8IZU9 778 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 TEX9Q8N6V9 391 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 RNF217Q8TC41 542 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 KIF9Q9HAQ2 790 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 ZFYVE28Q9HCC9 887 aa23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 BIN2Q9UBW5 565 aaPredicted RBP23.64■■□□□ 1.37
POLR2J3-220ENST00000613744 A0A0G2JMZ2 1700 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 NFIBO00712 420 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 CEP104O60308 925 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 ANXA13P27216 316 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 DHX9Q08211 1270 aaKnown RBP23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PSMD2Q13200 908 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 WDR78Q5VTH9 848 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 ZNF570Q96NI8 536 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 ETAA1Q9NY74 926 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PCDHA6Q9UN73 950 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 UTP11Q9Y3A2 253 aaKnown RBP23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PCDHA8Q9Y5H6 950 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 CCDC169A6NNP5 214 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 BACH1O14867 736 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 CHN1P15882 459 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 ORC2Q13416 577 aaPredicted RBP23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 UBE2SQ16763 222 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 TBC1D1Q86TI0 1168 aaPredicted RBP23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 DDX42Q86XP3 938 aaKnown RBP eCLIP23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 GPRC5AQ8NFJ5 357 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PLCD4Q9BRC7 762 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PORCNQ9H237 461 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 PSTPIP2Q9H939 334 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 RNF146Q9NTX7 359 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 TMEM260Q9NX78 707 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 STK17AQ9UEE5 414 aa23.63■■□□□ 1.37
POLR2J3-220ENST00000613744 DCDC2CA8MYV0 355 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 CA12O43570 354 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 WFS1O76024 890 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 GCLCP48506 637 aaPredicted RBP23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 DNA2P51530 1060 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 OAZ1P54368 228 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 PPP1R18Q6NYC8 613 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 PLIN2Q99541 437 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 RAB17Q9H0T7 212 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 RNF186Q9NXI6 227 aa23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 PACSIN2Q9UNF0 486 aaPredicted RBP23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 NOC2LQ9Y3T9 749 aaKnown RBP23.62■■□□□ 1.37
POLR2J3-220ENST00000613744 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 DAPK3O43293 454 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 AHCYL1O43865 530 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 OR52Z1P0C646 297 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 REXO1Q8N1G1 1221 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 LRRC57Q8N9N7 239 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 CLEC4DQ8WXI8 215 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 IFT74Q96LB3 600 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 STMN4Q9H169 189 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 PANK4Q9NVE7 773 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 TTC7AQ9ULT0 858 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 ADGRA2Q96PE1 1338 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 ESYT2A0FGR8 921 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 A6NHS1 94 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 KRIT1O00522 736 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 ABLIM1O14639 778 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 NOL4O94818 638 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 SNUPNO95149 360 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 CFBP00751 764 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 FESP07332 822 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 HOXA13P31271 388 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 FLT3P36888 993 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 RNASE9P60153 205 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 GALNTL6Q49A17 601 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 CCDC38Q502W7 563 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 USP17L6PQ6QN14 398 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 SV2BQ7L1I2 683 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 MICAL1Q8TDZ2 1067 aa23.61■■□□□ 1.37
POLR2J3-220ENST00000613744 MRPL11Q9Y3B7 192 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms