RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 RABGGTAQ92696 567 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 RAD54LQ92698 747 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 KIFAP3Q92845 792 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 P2RX5Q93086 422 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 IFT74Q96LB3 600 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 AK8Q96MA6 479 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 NECAB3Q96P71 396 aaPredicted RBP13.98□□□□□ -0.17
CSTF1-208ENST00000613138 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 ZSCAN16Q9H4T2 348 aaPredicted RBP13.98□□□□□ -0.17
CSTF1-208ENST00000613138 IGFLR1Q9H665 355 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
CSTF1-208ENST00000613138 LMCD1Q9NZU5 365 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
CSTF1-208ENST00000613138 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
CSTF1-208ENST00000613138 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PER2O15055 1255 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 HOXA2O43364 376 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 LAG3P18627 525 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 AXLP30530 894 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 SCNN1GP51170 649 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 DLX2Q07687 328 aaPredicted RBP13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
CSTF1-208ENST00000613138 STK38Q15208 465 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PTPROQ16827 1216 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 FAM187BQ17R55 369 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PLPP4Q5VZY2 271 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 GLB1LQ6UWU2 654 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 EP400NLQ6ZTU2 488 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 TMEM130Q8N3G9 435 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 CEP120Q8N960 986 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 RASSF8Q8NHQ8 419 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 AUTS2Q8WXX7 1259 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 CALML4Q96GE6 196 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 ZBTB45Q96K62 511 aaPredicted RBP13.97□□□□□ -0.17
CSTF1-208ENST00000613138 ZNF558Q96NG5 402 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 VN1R3Q9BXE9 311 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 COL25A1Q9BXS0 654 aaPredicted RBP13.97□□□□□ -0.17
CSTF1-208ENST00000613138 CCSER1Q9C0I3 900 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 NT5C3AQ9H0P0 336 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 NSUN3Q9H649 340 aaKnown RBP13.97□□□□□ -0.17
CSTF1-208ENST00000613138 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PCDHB12Q9Y5F1 795 aa13.97□□□□□ -0.17
CSTF1-208ENST00000613138 PDCD11Q14690 1871 aaKnown RBP13.96□□□□□ -0.17
CSTF1-208ENST00000613138 ARL5CA6NH57 179 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 H3BQ06 376 aaPredicted RBP13.96□□□□□ -0.17
CSTF1-208ENST00000613138 ACKR2O00590 384 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 GALTP07902 379 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 GUCY2CP25092 1073 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 DNM1Q05193 864 aaKnown RBP13.96□□□□□ -0.17
CSTF1-208ENST00000613138 CLUL1Q15846 466 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 MAPK6Q16659 721 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 SLC27A1Q6PCB7 646 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 PDILTQ8N807 584 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 GSTCDQ8NEC7 633 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 PGBD4Q96DM1 585 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 TARS2Q9BW92 718 aaKnown RBP13.96□□□□□ -0.17
CSTF1-208ENST00000613138 C2orf40Q9H1Z8 148 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
CSTF1-208ENST00000613138 KMT5AQ9NQR1 393 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 ARHGAP28Q9P2N2 729 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 PARP2Q9UGN5 583 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 NCOR1O75376 2440 aa13.96□□□□□ -0.17
CSTF1-208ENST00000613138 HIDE1A8MVS5 230 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 SPTLC2O15270 562 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 SKIP12755 728 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 KCNA5P22460 613 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 IGFBP6P24592 240 aaPredicted RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 LTBRP36941 435 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 NRIP1P48552 1158 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 RNASELQ05823 741 aaKnown RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 DMP1Q13316 513 aaPredicted RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 GIT2Q14161 759 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 PPP2R5AQ15172 486 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 SEZ6Q53EL9 994 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 DYMQ7RTS9 669 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 STAMQ92783 540 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 HLA-CQ95604 372 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 ASB2Q96Q27 587 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 TRIM6Q9C030 488 aaPredicted RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 CLDND1Q9NY35 253 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 SPG21Q9NZD8 308 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
CSTF1-208ENST00000613138 VWA8A3KMH1 1905 aa13.95□□□□□ -0.18
CSTF1-208ENST00000613138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.94□□□□□ -0.18
CSTF1-208ENST00000613138 MYMKA6NI61 221 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms