RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 PAK1Q13153 545 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 PAK2Q13177 524 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 TTI2Q6NXR4 508 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 HTATIP2Q9BUP3 242 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 EIF2AQ9BY44 585 aaKnown RBP13.21□□□□□ -0.3
CLK4-215ENST00000611733 AGPAT5Q9NUQ2 364 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 ANKFY1Q9P2R3 1169 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 PIN4Q9Y237 131 aaKnown RBP13.21□□□□□ -0.3
CLK4-215ENST00000611733 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.3
CLK4-215ENST00000611733 PSMA7O14818 248 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 GPR182O15218 404 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 HARSP12081 509 aaKnown RBP13.2□□□□□ -0.3
CLK4-215ENST00000611733 STIM1Q13586 685 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 BADQ92934 168 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 IFIH1Q9BYX4 1025 aaKnown RBP13.2□□□□□ -0.3
CLK4-215ENST00000611733 GTPBP4Q9BZE4 634 aaKnown RBP13.2□□□□□ -0.3
CLK4-215ENST00000611733 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
CLK4-215ENST00000611733 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 UBE4BO95155 1302 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 GOLGA8IPA6NC78 632 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 GOLGA8JA6NMD2 632 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 PDXKO00764 312 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 ACRP10323 421 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 PROZP22891 400 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 PLEKHG4Q58EX7 1191 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 ZPBP2Q6X784 338 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 CEP120Q8N960 986 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 LINC01599Q8WXQ3 324 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 SAAL1Q96ER3 474 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 CBX8Q9HC52 389 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 RWDD2AQ9UIY3 292 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TRAF3IP3Q9Y228 551 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TNFSF13BQ9Y275 285 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
CLK4-215ENST00000611733 TOM1L1O75674 476 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 KIF20AO95235 890 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 CXCL10P02778 98 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 SCP2P22307 547 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 CASP4P49662 377 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 ZNF165P49910 485 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 CYP2J2P51589 502 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 DSC3Q14574 896 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 C16orf59Q7L2K0 433 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
CLK4-215ENST00000611733 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 USP38Q8NB14 1042 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 CDT1Q9H211 546 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 HES2Q9Y543 173 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 STYXL1Q9Y6J8 313 aa13.19□□□□□ -0.3
CLK4-215ENST00000611733 A0A0B4J269 797 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 CLDN3O15551 220 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 NPTXRO95502 500 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 NR3C1P04150 777 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 IBSPP21815 317 aaPredicted RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 MATR3P43243 847 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLK4-215ENST00000611733 EPHB4P54760 987 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 OSTNP61366 133 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 NCAPHQ15003 741 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 IQCB1Q15051 598 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ARMCX5Q6P1M9 558 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 POMGNT1Q8WZA1 660 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ADAM2Q99965 735 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 DMAC2Q9NW81 257 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 DACH1Q9UI36 760 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 CAPN15O75808 1086 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ABCD1P33897 745 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 TNFSF9P41273 254 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ACOT2P49753 483 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 MCL1Q07820 350 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ADAM9Q13443 819 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 TWF2Q6IBS0 349 aaKnown RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 MPZL3Q6UWV2 235 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 HS2ST1Q7LGA3 356 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
CLK4-215ENST00000611733 HSPBP1Q9NZL4 362 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 PRKAG2Q9UGJ0 569 aa13.18□□□□□ -0.3
CLK4-215ENST00000611733 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
CLK4-215ENST00000611733 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms