RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 MAPTP10636 758 aaKnown RBP24.29■■□□□ 1.48
UBE3C-209ENST00000611269 NAMPTP43490 491 aa24.29■■□□□ 1.48
UBE3C-209ENST00000611269 PPP2R5AQ15172 486 aa24.29■■□□□ 1.48
UBE3C-209ENST00000611269 MEA1Q16626 185 aa24.29■■□□□ 1.48
UBE3C-209ENST00000611269 FAM49AQ9H0Q0 323 aaPredicted RBP24.29■■□□□ 1.48
UBE3C-209ENST00000611269 DNAI1Q9UI46 699 aa24.29■■□□□ 1.48
UBE3C-209ENST00000611269 SMIM35A0A1B0GVV1 85 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 LRRIQ4A6NIV6 560 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 PRPF6O94906 941 aaKnown RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 VTNP04004 478 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 GJA8P48165 433 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 KLK7P49862 253 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 HAUS6Q7Z4H7 955 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 TMEM161BQ8NDZ6 487 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 PCMTD1Q96MG8 357 aaPredicted RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 MAP7D2Q96T17 732 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 KIAA0100Q14667 2235 aaKnown RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 PPP1R37O75864 691 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 SRGAP2CP0DJJ0 459 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 HOXD13P35453 343 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 MNX1P50219 401 aaPredicted RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 ADAM9Q13443 819 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 CCDC40Q4G0X9 1142 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 WDR59Q6PJI9 974 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 ZNF397Q8NF99 534 aaPredicted RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 ZNF668Q96K58 619 aaPredicted RBP24.28■■□□□ 1.48
UBE3C-209ENST00000611269 STRA6Q9BX79 667 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 AGPAT5Q9NUQ2 364 aa24.28■■□□□ 1.48
UBE3C-209ENST00000611269 A0A0U1RQG5 324 aaPredicted RBP24.27■■□□□ 1.48
UBE3C-209ENST00000611269 CETN3O15182 167 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 KCNA1Q09470 495 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 TRIM59Q8IWR1 403 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 RNF149Q8NC42 400 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 SLC17A8Q8NDX2 589 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 DEPTORQ8TB45 409 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 NLRP4Q96MN2 994 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 PPP1R16BQ96T49 567 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 CHP1Q99653 195 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 ST6GALNAC4Q9H4F1 302 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 KCNG1Q9UIX4 513 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 PCDHB13Q9Y5F0 798 aa24.27■■□□□ 1.48
UBE3C-209ENST00000611269 EIF3DO15371 548 aaKnown RBP eCLIP24.26■■□□□ 1.477e-9■□□□□ 10
UBE3C-209ENST00000611269 CALUO43852 315 aaPredicted RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 CDK17Q00537 523 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 PTPN11Q06124 597 aaPredicted RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 STXBP4Q6ZWJ1 553 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 DNAJB3Q8WWF6 145 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 EDEM3Q9BZQ6 932 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 ARHGAP28Q9P2N2 729 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 EPN1Q9Y6I3 576 aaPredicted RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 DENND3A2RUS2 1198 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 ASAP2O43150 1006 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 GTF2BQ00403 316 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 PTGISQ16647 500 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 SLC43A3Q8NBI5 491 aa24.26■■□□□ 1.47
UBE3C-209ENST00000611269 TRMT13Q9NUP7 481 aaKnown RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 TYW1Q9NV66 732 aaKnown RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 ZNHIT6Q9NWK9 470 aaKnown RBP24.26■■□□□ 1.47
UBE3C-209ENST00000611269 HNRNPH3P31942 346 aaKnown RBP24.25■■□□□ 1.47
UBE3C-209ENST00000611269 TMEM62Q0P6H9 643 aa24.25■■□□□ 1.47
UBE3C-209ENST00000611269 TFDP1Q14186 410 aa24.25■■□□□ 1.47
UBE3C-209ENST00000611269 TAF2Q6P1X5 1199 aa24.25■■□□□ 1.47
UBE3C-209ENST00000611269 TMEM106CQ9BVX2 250 aa24.25■■□□□ 1.47
UBE3C-209ENST00000611269 SENP6Q9GZR1 1112 aaPredicted RBP24.25■■□□□ 1.47
UBE3C-209ENST00000611269 ARVCFO00192 962 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 GNG11P61952 73 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 ALCAMQ13740 583 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 SERINC5Q86VE9 423 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 UBE4BO95155 1302 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 NDUFA10O95299 355 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 NR2F2P24468 414 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 GPC3P51654 580 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 NLRP11P59045 1033 aaKnown RBP24.24■■□□□ 1.47
UBE3C-209ENST00000611269 CDCA2Q69YH5 1023 aaPredicted RBP24.24■■□□□ 1.47
UBE3C-209ENST00000611269 FRMD5Q7Z6J6 570 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 DIS3LQ8TF46 1054 aaKnown RBP24.24■■□□□ 1.47
UBE3C-209ENST00000611269 TBX20Q9UMR3 447 aa24.24■■□□□ 1.47
UBE3C-209ENST00000611269 SIP14410 1827 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 A0A087WZ62 844 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 H0YCG3 227 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 FANCGO15287 622 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 RPL13P26373 211 aaKnown RBP24.23■■□□□ 1.47
UBE3C-209ENST00000611269 NFIL3Q16649 462 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 TAS1R3Q7RTX0 852 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 WNT8BQ93098 351 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 FDXACB1Q9BRP7 624 aaPredicted RBP24.23■■□□□ 1.47
UBE3C-209ENST00000611269 IKZF4Q9H2S9 585 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 IFT122Q9HBG6 1241 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 NOD1Q9Y239 953 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.23■■□□□ 1.47
UBE3C-209ENST00000611269 ZMYM2Q9UBW7 1377 aa24.23■■□□□ 1.47
UBE3C-209ENST00000611269 SLU7O95391 586 aaKnown RBP24.22■■□□□ 1.47
UBE3C-209ENST00000611269 CASQ1P31415 396 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 KCNMA1Q12791 1236 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 KIZQ2M2Z5 673 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 CCDC170Q8IYT3 715 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 ACRBPQ8NEB7 543 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 NLRP7Q8WX94 980 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 TSC1Q92574 1164 aa24.22■■□□□ 1.47
UBE3C-209ENST00000611269 SCLT1Q96NL6 688 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms