RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 GOLPH3Q9H4A6 298 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 VIPAS39Q9H9C1 493 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 STXBP5LQ9Y2K9 1186 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 SOWAHBA6NEL2 793 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 KCNK3O14649 394 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 HNRNPDLO14979 420 aaKnown RBP30.34■■■□□ 2.45
CSPG5-205ENST00000610462 GTF2H1P32780 548 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 FAM193AP78312 1265 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 C8orf74Q6P047 294 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 USP37Q86T82 979 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 NCAPG2Q86XI2 1143 aa30.34■■■□□ 2.45
CSPG5-205ENST00000610462 IGKV6D-21A0A0A0MT36 114 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 H3BQF6 201 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 IRF6O14896 467 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 POLR3GO15318 223 aaPredicted RBP30.33■■■□□ 2.45
CSPG5-205ENST00000610462 MYBL2P10244 700 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 IRX3P78415 501 aaPredicted RBP30.33■■■□□ 2.45
CSPG5-205ENST00000610462 PEX26Q7Z412 305 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 SEMA4DQ92854 862 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 ACBD3Q9H3P7 528 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 SEPT11Q9NVA2 429 aaKnown RBP30.33■■■□□ 2.45
CSPG5-205ENST00000610462 SUCLA2Q9P2R7 463 aaPredicted RBP30.33■■■□□ 2.45
CSPG5-205ENST00000610462 SIP14410 1827 aa30.33■■■□□ 2.45
CSPG5-205ENST00000610462 LRRC37A2A6NM11 1700 aa30.32■■■□□ 2.45
CSPG5-205ENST00000610462 UBA1P22314 1058 aaKnown RBP30.32■■■□□ 2.44
CSPG5-205ENST00000610462 SLC35G2Q8TBE7 412 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 SLC20A1Q8WUM9 679 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 BICD1Q96G01 975 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 OTUD5Q96G74 571 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 STIM2Q9P246 746 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 TNNT3P45378 269 aaPredicted RBP30.32■■■□□ 2.44
CSPG5-205ENST00000610462 GPC3P51654 580 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 ERO1BQ86YB8 467 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 USP38Q8NB14 1042 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 KCNN1Q92952 543 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 KAT5Q92993 513 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 POP1Q99575 1024 aaKnown RBP30.32■■■□□ 2.44
CSPG5-205ENST00000610462 NIFKQ9BYG3 293 aaKnown RBP30.32■■■□□ 2.44
CSPG5-205ENST00000610462 DHX33Q9H6R0 707 aaKnown RBP30.32■■■□□ 2.44
CSPG5-205ENST00000610462 SPON1Q9HCB6 807 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 TAS2R14Q9NYV8 317 aa30.32■■■□□ 2.44
CSPG5-205ENST00000610462 ANKRD62A6NC57 917 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 ZBTB48P10074 688 aaPredicted RBP30.31■■■□□ 2.44
CSPG5-205ENST00000610462 MFAP3P55082 362 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 SLC7A5Q01650 507 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 DAAM2Q86T65 1068 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 PALB2Q86YC2 1186 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 FAM71AQ8IYT1 594 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 KREMEN1Q96MU8 473 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 SELENOOQ9BVL4 669 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 CXCL11O14625 94 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 ABCB4P21439 1286 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 NT5DC3Q86UY8 548 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 GSPT2Q8IYD1 628 aaKnown RBP30.31■■■□□ 2.44
CSPG5-205ENST00000610462 AENQ8WTP8 325 aaKnown RBP30.31■■■□□ 2.44
CSPG5-205ENST00000610462 PORCNQ9H237 461 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 OSGEPQ9NPF4 335 aa30.31■■■□□ 2.44
CSPG5-205ENST00000610462 ZHX1Q9UKY1 873 aaPredicted RBP30.31■■■□□ 2.44
CSPG5-205ENST00000610462 FARP2O94887 1054 aaPredicted RBP30.3■■■□□ 2.44
CSPG5-205ENST00000610462 SCP2P22307 547 aa30.3■■■□□ 2.44
CSPG5-205ENST00000610462 PPM1KQ8N3J5 372 aa30.3■■■□□ 2.44
CSPG5-205ENST00000610462 FBXL13Q8NEE6 735 aa30.3■■■□□ 2.44
CSPG5-205ENST00000610462 PKNOX2Q96KN3 472 aa30.3■■■□□ 2.44
CSPG5-205ENST00000610462 PAGR1Q9BTK6 254 aa30.3■■■□□ 2.44
CSPG5-205ENST00000610462 FHDC1Q9C0D6 1143 aaPredicted RBP30.3■■■□□ 2.44
CSPG5-205ENST00000610462 ASCC2Q9H1I8 757 aaPredicted RBP30.3■■■□□ 2.44
CSPG5-205ENST00000610462 ZCCHC17Q9NP64 241 aaKnown RBP30.3■■■□□ 2.44
CSPG5-205ENST00000610462 TOPORSQ9NS56 1045 aaPredicted RBP30.3■■■□□ 2.44
CSPG5-205ENST00000610462 GSTTP1A0A1W2PQM5 241 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 TNFRSF8P28908 595 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 ANKRD13AQ8IZ07 590 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 ACTRT1Q8TDG2 376 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 SHC3Q92529 594 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 UPF1Q92900 1129 aaKnown RBP eCLIP30.29■■■□□ 2.44
CSPG5-205ENST00000610462 TMEM143Q96AN5 459 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 CLMNQ96JQ2 1002 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 TMEM59LQ9UK28 342 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 CNMDO75829 334 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 LIG4P49917 911 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 MRPS25P82663 173 aaKnown RBP30.29■■■□□ 2.44
CSPG5-205ENST00000610462 NEDD9Q14511 834 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 RPUSD2Q8IZ73 545 aaKnown RBP30.29■■■□□ 2.44
CSPG5-205ENST00000610462 METTL13Q8N6R0 699 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 ARHGEF26Q96DR7 871 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 NT5C1BQ96P26 610 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 CEP89Q96ST8 783 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 FAM213AQ9BRX8 229 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 THAP2Q9H0W7 228 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 ISCUQ9H1K1 167 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 KIAA1586Q9HCI6 787 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 RAB20Q9NX57 234 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 AMFRQ9UKV5 643 aa30.29■■■□□ 2.44
CSPG5-205ENST00000610462 SPDYE5A6NIY4 337 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 TULP1O00294 542 aaPredicted RBP30.28■■■□□ 2.44
CSPG5-205ENST00000610462 ARL2P36404 184 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 USP8P40818 1118 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 ZNF771Q7L3S4 317 aaPredicted RBP30.28■■■□□ 2.44
CSPG5-205ENST00000610462 HELQQ8TDG4 1101 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 ASAP3Q8TDY4 903 aa30.28■■■□□ 2.44
CSPG5-205ENST00000610462 HES6Q96HZ4 224 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms