RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 NRP2O60462 931 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 ABLIM3O94929 683 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 CT47B1P0C2W7 299 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 ZSCAN20P17040 1043 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 LRRC41Q15345 812 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 NRN1LQ496H8 165 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 CCDC178Q5BJE1 867 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 TMEM240Q5SV17 173 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 TCTN3Q6NUS6 607 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 GAREM2Q75VX8 874 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 CHPFQ8IZ52 775 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 CPA6Q8N4T0 437 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 ADOQ96SZ5 270 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 RTFDC1Q9BY42 306 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 HAPLN2Q9GZV7 340 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 EVLQ9UI08 416 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 GIT1Q9Y2X7 761 aa5.67□□□□□ -1.5
SMCHD1-213ENST00000609587 TSPAN6O43657 245 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 STAT5BP51692 787 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 NRG3P56975 720 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 CCT2P78371 535 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 PTH1RQ03431 593 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 NFYCQ13952 458 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 ZNF568Q3ZCX4 644 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 LARP4Q71RC2 724 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 BCL6BQ8N143 479 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 TSPEARQ8WU66 669 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 JPH3Q8WXH2 748 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 CAMKK2Q96RR4 588 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 ACE2Q9BYF1 805 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 RHOBTB2Q9BYZ6 727 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 TCF7L1Q9HCS4 588 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 DNAI1Q9UI46 699 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 VWA7Q9Y334 891 aa5.66□□□□□ -1.5
SMCHD1-213ENST00000609587 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 PF4V1P10720 104 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 DGCR2P98153 550 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 MGAT5Q09328 741 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 MAN2A1Q16706 1144 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 RNF151Q2KHN1 245 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 ANO4Q32M45 955 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 USP39Q53GS9 565 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 HS1BP3Q53T59 392 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 AGBL4Q5VU57 503 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 LMBR1LQ6UX01 489 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 USP30Q70CQ3 517 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 GLB1L2Q8IW92 636 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 RTKN2Q8IZC4 609 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 PPM1NQ8N819 430 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 FATE1Q969F0 183 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 NEIL1Q96FI4 390 aaPredicted RBP5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 WDR92Q96MX6 357 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 LMF1Q96S06 567 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 SOX7Q9BT81 388 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 MSL2Q9HCI7 577 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 ZBTB21Q9ULJ3 1066 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 ANKRD6Q9Y2G4 727 aa5.65□□□□□ -1.5
SMCHD1-213ENST00000609587 NDUFS2O75306 463 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 RFPL1O75677 317 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 SEC24DO94855 1032 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 IL33O95760 270 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 C5AR1P21730 350 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 MRE11P49959 708 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 MEOX1P50221 254 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 RRADP55042 308 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 SESN2P58004 480 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 RAC3P60763 192 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 PCOLCEQ15113 449 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 KLHDC10Q6PID8 442 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 WDR75Q8IWA0 830 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 NKD2Q969F2 451 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 HSPBAP1Q96EW2 488 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 FDXACB1Q9BRP7 624 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 OSBPL6Q9BZF3 934 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 CSRNP2Q9H175 543 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 OR10A2Q9H208 303 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 NR2E1Q9Y466 385 aa5.64□□□□□ -1.51
SMCHD1-213ENST00000609587 A0A087X1B8 175 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 ARHGAP6O43182 974 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 DAPK3O43293 454 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 FSBPO95073 299 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 HNRNPLP14866 589 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 VCAM1P19320 739 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 MCM7P33993 719 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 INHBCP55103 352 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 KIF23Q02241 960 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 ADRM1Q16186 407 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 TBR1Q16650 682 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 HSP90AB2PQ58FF8 381 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 BTNL9Q6UXG8 535 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 PPP1R14CQ8TAE6 165 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 EXTL1Q92935 676 aa5.63□□□□□ -1.51
SMCHD1-213ENST00000609587 GFM2Q969S9 779 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms