RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 NAA20P61599 178 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 CSNK2BP67870 215 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 CTDSPL2Q05D32 466 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 METTL2BQ6P1Q9 378 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 TMC5Q6UXY8 1006 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 KIF6Q6ZMV9 814 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 RAPH1Q70E73 1250 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 RTL10Q7L3V2 364 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 ZC3H18Q86VM9 953 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 NOA1Q8NC60 698 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 ST13P5Q8NFI4 369 aaPredicted RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 STK32AQ8WU08 396 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 SPOCK2Q92563 424 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 LRRC59Q96AG4 307 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 L3MBTL3Q96JM7 780 aaPredicted RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 NOX5Q96PH1 765 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 GPATCH1Q9BRR8 931 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 EHD1Q9H4M9 534 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 SYNDIG1Q9H7V2 258 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 IFT22Q9H7X7 185 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 C12orf10Q9HB07 376 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 NTN4Q9HB63 628 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 PANK4Q9NVE7 773 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 CDC23Q9UJX2 597 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 CAPN11Q9UMQ6 739 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 MRPS23Q9Y3D9 190 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 RWDD3Q9Y3V2 267 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 EMILIN1Q9Y6C2 1016 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 MRPL42Q9Y6G3 142 aaKnown RBP5.05□□□□□ -1.6
HDDC2-208ENST00000609021 FAM135BQ49AJ0 1406 aa5.05□□□□□ -1.6
HDDC2-208ENST00000609021 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 METP08581 1390 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 FAM170AA1A519 330 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 H3BUI4 141 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 H7C0C1 242 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 AXIN1O15169 862 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 OPHN1O60890 802 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 BCAR3O75815 825 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 DGKIO75912 1065 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 BAG3O95817 575 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 AGR2O95994 175 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 GAS8O95995 478 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 COL6A1P12109 1028 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CTRB1P17538 263 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 NEK4P51957 841 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ARFIP2P53365 341 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ALDH18A1P54886 795 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 RPP38P78345 283 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SQLEQ14534 574 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ASIC2Q16515 512 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SPDYAQ5MJ70 313 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 FBXO31Q5XUX0 539 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ALS2CLQ60I27 953 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CTRB2Q6GPI1 263 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 DUS1LQ6P1R4 473 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 POMZP3Q6PJE2 187 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ILDR1Q86SU0 546 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CYP4X1Q8N118 509 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 REXO1Q8N1G1 1221 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SPATA5Q8NB90 893 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SHCBP1Q8NEM2 672 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 NUDT16Q96DE0 195 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ARL5BQ96KC2 179 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 C8orf33Q9H7E9 229 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 C10orf88Q9H8K7 445 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 TUFT1Q9NNX1 390 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 TIMMDC1Q9NPL8 285 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 WASH6PQ9NQA3 447 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CHST12Q9NRB3 414 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 HPCAL4Q9UM19 191 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 DOLKQ9UPQ8 538 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 LRCH1Q9Y2L9 728 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ZDHHC9Q9Y397 364 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SNX9Q9Y5X1 595 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 EPN1Q9Y6I3 576 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 GMNCA6NCL1 334 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 DNM1LO00429 736 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 VWA5AO00534 786 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 TLR2O60603 784 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CPA3P15088 417 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CDC27P30260 824 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 GSSP48637 474 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 COPB1P53618 953 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 POLR2GP62487 172 aaKnown RBP eCLIP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 SLFN5Q08AF3 891 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 TRAP1Q12931 704 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 IDI1Q13907 227 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 MAJINQ3KP22 176 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CAVIN4Q5BKX8 364 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 FASTKD5Q7L8L6 764 aaKnown RBP5.04□□□□□ -1.6
HDDC2-208ENST00000609021 TXNDC2Q86VQ3 553 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 UNC45BQ8IWX7 931 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 IFT20Q8IY31 132 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CCDC197Q8NCU1 140 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 GIPC3Q8TF64 312 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 CYFIP2Q96F07 1278 aa5.04□□□□□ -1.6
HDDC2-208ENST00000609021 DYDC2Q96IM9 177 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms