RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 PDZD7Q9H5P4 517 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 HCSTQ9UBK5 93 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 RCOR1Q9UKL0 485 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 PLAGL2Q9UPG8 496 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 INPP5FQ9Y2H2 1132 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 TRANK1O15050 2925 aa16.72■□□□□ 0.27
AL390728.4-204ENST00000606454 TTLL13PA6NNM8 815 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 H0YCG3 227 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 GRM6O15303 877 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 FAM13AO94988 1023 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 KRT85P78386 507 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 MYCT1Q8N699 235 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 PDILTQ8N807 584 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 COLGALT1Q8NBJ5 622 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 LMAN2LQ9H0V9 348 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 PARVGQ9HBI0 331 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 ALG13Q9NP73 1137 aaKnown RBP16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 KANSL3Q9P2N6 904 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 PCDHA7Q9UN72 937 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 HES2Q9Y543 173 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 EYSQ5T1H1 3165 aa16.71■□□□□ 0.27
AL390728.4-204ENST00000606454 A0A087X0B3 334 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 EDN1P05305 212 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 ITGB1P05556 798 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 ZNF131P52739 623 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 STRN3Q13033 797 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 SHC4Q6S5L8 630 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 APBB1IPQ7Z5R6 666 aaPredicted RBP16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 SPPL3Q8TCT6 385 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 ZNF558Q96NG5 402 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 APOL6Q9BWW8 343 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 MRPL4Q9BYD3 311 aaKnown RBP16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 NXF3Q9H4D5 531 aaKnown RBP16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 ZHX3Q9H4I2 956 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 GIT1Q9Y2X7 761 aa16.7■□□□□ 0.26
AL390728.4-204ENST00000606454 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 ARL5CA6NH57 179 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 FGF18O76093 207 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 SCP2P22307 547 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 PPM1AP35813 382 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 ALDH7A1P49419 539 aaKnown RBP16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 NUCB2P80303 420 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 DCAF4L1Q3SXM0 396 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 DDX12PQ92771 950 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 GAD1Q99259 594 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 PARP2Q9UGN5 583 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
AL390728.4-204ENST00000606454 INPPL1O15357 1258 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 TRAK2O60296 914 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 ZC3H11AO75152 810 aaKnown RBP eCLIP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 POMCP01189 267 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 MAPTP10636 758 aaKnown RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 AKAP5P24588 427 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 NCKAP1LP55160 1127 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 BCAR1P56945 870 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 KRT17Q04695 432 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 UBE3AQ05086 875 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 SKIV2LQ15477 1246 aaKnown RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 TIGD5Q53EQ6 642 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 EEF1DP3Q658K8 133 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 POF1BQ8WVV4 589 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 FAM193BQ96PV7 902 aaPredicted RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 TARS2Q9BW92 718 aaKnown RBP16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 NRDE2Q9H7Z3 1164 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 SPG21Q9NZD8 308 aa16.68■□□□□ 0.26
AL390728.4-204ENST00000606454 MYMKA6NI61 221 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 ABCD1P33897 745 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 PBX3P40426 434 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 MLH1P40692 756 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 PLCB3Q01970 1234 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 RESP18Q5W5W9 173 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 ZNF280BQ86YH2 543 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 SLC17A8Q8NDX2 589 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 KCNN1Q92952 543 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 DHX58Q96C10 678 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 ZFP42Q96MM3 310 aa16.67■□□□□ 0.26
AL390728.4-204ENST00000606454 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms