RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PROZP22891 400 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PON1P27169 355 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AP3M2P53677 418 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MYL7Q01449 175 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MFSD10Q14728 455 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PSMD6Q15008 389 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SURF1Q15526 300 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KLHDC7AQ5VTJ3 777 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 E4F1Q66K89 784 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 DPY19L2P1Q6NXN4 242 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZNF662Q6ZS27 426 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TSHZ1Q6ZSZ6 1077 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SRGAP1Q7Z6B7 1085 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KAT2BQ92831 832 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 LSM14BQ9BX40 385 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SUGCTQ9HAC7 445 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SPC25Q9HBM1 224 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FAM207AQ9NSI2 230 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AGPAT5Q9NUQ2 364 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 AGO2Q9UKV8 859 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CCDC175P0C221 793 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 UCHL3P15374 230 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 YY1P25490 414 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PSEN2P49810 448 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ADAM17P78536 824 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRKCZQ05513 592 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MCL1Q07820 350 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 DRP2Q13474 957 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 WDR59Q6PJI9 974 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RHPN2Q8IUC4 686 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TXLNBQ8N3L3 684 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 IKZF4Q9H2S9 585 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TNFSF13BQ9Y275 285 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TISP43B9A030 160 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CLDN3O15551 220 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 OFD1O75665 1012 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 HMGCRP04035 888 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ADRB2P07550 413 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KLK7P49862 253 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MXI1P50539 228 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CLCN3P51790 818 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PURAQ00577 322 aaKnown RBP13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KIAA0753Q2KHM9 967 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PRAMEF19Q5SWL8 479 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MAP3K21Q5TCX8 1036 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 KRT39Q6A163 491 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 MPZL3Q6UWV2 235 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 CBWD2Q8IUF1 395 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 NME8Q8N427 588 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 METTL13Q8N6R0 699 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TRPV1Q8NER1 839 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ARHGAP39Q9C0H5 1083 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SIX2Q9NPC8 291 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GABRQQ9UN88 632 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 PPP2R2CQ9Y2T4 447 aa13.35□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EIF3CLB5ME19 914 aaKnown RBP13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 ABLIM1O14639 778 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 EPHB6O15197 1021 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 OGTO15294 1046 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 FAM189A1O60320 539 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 GFPT2O94808 682 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 LCA5LO95447 670 aa13.34□□□□□ -0.27
NEDD8-MDP1-203ENST00000604306 SERPING1P05155 500 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms