RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 MPP2Q14168 576 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 NAIF1Q69YI7 327 aaPredicted RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 KSR1Q8IVT5 923 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 STK38LQ9Y2H1 464 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 ACSL3O95573 720 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 GPC5P78333 572 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 MESDQ14696 234 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 ZKSCAN8Q15776 578 aaPredicted RBP16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 MYCT1Q8N699 235 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 ANKRD42Q8N9B4 389 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 RMDN2Q96LZ7 410 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 FAM20AQ96MK3 541 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 WNT8AQ9H1J5 351 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 MLXIPLQ9NP71 852 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
LYSMD4-211ENST00000604213 FOXO6A8MYZ6 492 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 EML1O00423 815 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 SMNDC1O75940 238 aaKnown RBP eCLIP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 FAM13AO94988 1023 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 SHMT1P34896 483 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CYP2J2P51589 502 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CCNG1P51959 295 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CGB2Q6NT52 195 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 C12orf50Q8NA57 414 aaPredicted RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 SPDL1Q96EA4 605 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 EIF2AK1Q9BQI3 630 aaKnown RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 RGL1Q9NZL6 768 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CHORDC1Q9UHD1 332 aaPredicted RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MSH4O15457 936 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 GH1P01241 217 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CCNB1P14635 433 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CDC25CP30307 473 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 PDE6BP35913 854 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 IRX1P78414 480 aaPredicted RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MGAT5Q09328 741 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CDCA2Q69YH5 1023 aaPredicted RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 GDAP1Q8TB36 358 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MOV10L1Q9BXT6 1211 aaKnown RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 KCNK9Q9NPC2 374 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 DDX4Q9NQI0 724 aaKnown RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 AGPAT3Q9NRZ7 376 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 CTNNAL1Q9UBT7 734 aa16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
LYSMD4-211ENST00000604213 MTA2O94776 668 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 UFL1O94874 794 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 CALCOCO2Q13137 446 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 RHBDF2Q6PJF5 856 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 MORC4Q8TE76 937 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 FIZ1Q96SL8 496 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 DNAJC18Q9H819 358 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 WHRNQ9P202 907 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 FRMD4BQ9Y2L6 1034 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 FOCADQ5VW36 1801 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ECEL1O95672 775 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ATP2A2P16615 1042 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 RFX1P22670 979 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ATP5DP30049 168 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 CHKAP35790 457 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ANKRD20A2Q5SQ80 823 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ANKRD20A1Q5TYW2 823 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 ANKRD20A3Q5VUR7 823 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 RNF43Q68DV7 783 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 C1orf186Q6ZWK4 172 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 RPUSD2Q8IZ73 545 aaKnown RBP16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
LYSMD4-211ENST00000604213 LIN7AO14910 233 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 WFS1O76024 890 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 SKIV2L2P42285 1042 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 ATP11AP98196 1134 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 MKRN3Q13064 507 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 ZNF746Q6NUN9 644 aaPredicted RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 RNF207Q6ZRF8 634 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 HS2ST1Q7LGA3 356 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 TGS1Q96RS0 853 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 PCDHB18PQ96TA0 734 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 LRRC19Q9H756 370 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 BRAFP15056 766 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 GCKP35557 465 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 SREBF1P36956 1147 aa16.36■□□□□ 0.21
LYSMD4-211ENST00000604213 BLMHQ13867 455 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms