RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 MAN2A1Q16706 1144 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 SLC9A9Q8IVB4 645 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 C12orf56Q8IXR9 622 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 FAM186BQ8IYM0 893 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 GOLGA5Q8TBA6 731 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 EXOC7Q9UPT5 735 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 EVPLQ92817 2033 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 H0YCG3 227 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 SLC16A3O15427 465 aaKnown RBP18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 EXOC3O60645 756 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 PRKCBP05771 671 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 CYP2C9P11712 490 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 RPL13P26373 211 aaKnown RBP18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 GPC3P51654 580 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 UBXN1Q04323 297 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 STRN3Q13033 797 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 MTFR1Q15390 333 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 C7orf31Q8N865 590 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 PLEKHO2Q8TD55 490 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 WNT8BQ93098 351 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 TMEM134Q9H6X4 195 aa18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 HMX1Q9NP08 348 aaPredicted RBP18.93■□□□□ 0.62
PPFIA3-207ENST00000602716 DNAH12Q6ZR08 3092 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 C17orf102A2RUQ5 167 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 LIG4P49917 911 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 TBX2Q13207 712 aaPredicted RBP18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 ELF2Q15723 593 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 KIZQ2M2Z5 673 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 ZBTB41Q5SVQ8 909 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 GDF6Q6KF10 455 aaPredicted RBP18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 CDR2LQ86X02 465 aaPredicted RBP18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 CBWD2Q8IUF1 395 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 DNAJB3Q8WWF6 145 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 NDST4Q9H3R1 872 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 CDHR5Q9HBB8 845 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 ANKFY1Q9P2R3 1169 aa18.92■□□□□ 0.62
PPFIA3-207ENST00000602716 FRMPD3Q5JV73 1810 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 INO80B-WBP1J3KQ70 363 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 KPNA6O60684 536 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 PIGRP01833 764 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 TRIM49P0CI25 452 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 TRIM49CP0CI26 452 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 EPB41P11171 864 aaKnown RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 TMOD1P28289 359 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 NLRP11P59045 1033 aaKnown RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 ETF1P62495 437 aaKnown RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 TFDP1Q14186 410 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 DCAF17Q5H9S7 520 aaPredicted RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 TMEM139Q8IV31 216 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 FAM84AQ96KN4 292 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 INO80BQ9C086 356 aaPredicted RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 ARMCX3Q9UH62 379 aaPredicted RBP18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 GNA14O95837 355 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 FGFR4P22455 802 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 FAM47CQ5HY64 1035 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 FRMD5Q7Z6J6 570 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 NLRP7Q8WX94 980 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 POMGNT1Q8WZA1 660 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 SLC35C1Q96A29 364 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 ADAMTS10Q9H324 1103 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 GTF2IRD1Q9UHL9 959 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 GINS2Q9Y248 185 aa18.91■□□□□ 0.62
PPFIA3-207ENST00000602716 ABLIM1O14639 778 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 ZEB2O60315 1214 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 HARSP12081 509 aaKnown RBP18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 PSMC2P35998 433 aaKnown RBP18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 EFNA5P52803 228 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 AMHR2Q16671 573 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 SPECC1LQ69YQ0 1117 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 TRIM65Q6PJ69 517 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 REXO1L1PQ8IX06 675 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 XXYLT1Q8NBI6 393 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 FZD8Q9H461 694 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 SMIM35A0A1B0GVV1 85 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 GPR32O75388 356 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 PHKA2P46019 1235 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 ACLYP53396 1101 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 WNT7BP56706 349 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 DLG4P78352 724 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 APBA1Q02410 837 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 MAPK6Q16659 721 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 SEZ6Q53EL9 994 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 EEF1DP3Q658K8 133 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 SCLT1Q96NL6 688 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 MKNK1Q9BUB5 465 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 C2orf40Q9H1Z8 148 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 STYXL1Q9Y6J8 313 aa18.9■□□□□ 0.62
PPFIA3-207ENST00000602716 RNF225M0QZC1 329 aaPredicted RBP18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 EPHB6O15197 1021 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 ASAP2O43150 1006 aa18.89■□□□□ 0.61
PPFIA3-207ENST00000602716 HSPA8P11142 646 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms