RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	RNF39	Q9H2S5	420 aa		13.72	□□□□□ -0.21
STRN4-223	ENST00000602223	DNAJB4	Q9UDY4	337 aa		13.72	□□□□□ -0.21
STRN4-223	ENST00000602223	CD207	Q9UJ71	328 aa		13.72	□□□□□ -0.21
STRN4-223	ENST00000602223	DNM3	Q9UQ16	869 aa		13.72	□□□□□ -0.21
STRN4-223	ENST00000602223	HES2	Q9Y543	173 aa		13.72	□□□□□ -0.21
STRN4-223	ENST00000602223	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	HIDE1	A8MVS5	230 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	POMC	P01189	267 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	SLC11A1	P49279	550 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	COASY	Q13057	564 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	KCNC3	Q14003	757 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	SMC1A	Q14683	1233 aa	Known RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	SMAD2	Q15796	467 aa	Known RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	CLUL1	Q15846	466 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	TMC7	Q7Z402	723 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	KCNK18	Q7Z418	384 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	BRAP	Q7Z569	592 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	CDR2L	Q86X02	465 aa	Predicted RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	HACE1	Q8IYU2	909 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	KCTD17	Q8N5Z5	321 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	VN1R2	Q8NFZ6	395 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	GAD1	Q99259	594 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	TRIM6	Q9C030	488 aa	Predicted RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	CCDC113	Q9H0I3	377 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	GBP3	Q9H0R5	595 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	ZBP1	Q9H171	429 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	NXF3	Q9H4D5	531 aa	Known RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	CD320	Q9NPF0	282 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	PRKAG3	Q9UGI9	489 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	GIT1	Q9Y2X7	761 aa		13.71	□□□□□ -0.21
STRN4-223	ENST00000602223	ZMYM2	Q9UBW7	1377 aa		13.71	□□□□□ -0.22
STRN4-223	ENST00000602223	VWA3A	A6NCI4	1184 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	C2orf71	A6NGG8	1288 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	ARL5C	A6NH57	179 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	TTLL13P	A6NNM8	815 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	ACKR2	O00590	384 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	NPTXR	O95502	500 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	PRKCB	P05771	671 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	MLH1	P40692	756 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	RBM10	P98175	930 aa	Known RBP	13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	MAPK6	Q16659	721 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	TMEM184A	Q6ZMB5	413 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	DDX53	Q86TM3	631 aa	Known RBP	13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	GJD3	Q8N144	294 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	MRPL43	Q8N983	215 aa	Known RBP	13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	SMRP1	Q8NCR6	262 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	DEPTOR	Q8TB45	409 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	IFT74	Q96LB3	600 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	PNMA5	Q96PV4	448 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	FAM193B	Q96PV7	902 aa	Predicted RBP	13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	APOL6	Q9BWW8	343 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	POLD4	Q9HCU8	107 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	MIOS	Q9NXC5	875 aa		13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	PDCD11	Q14690	1871 aa	Known RBP	13.7	□□□□□ -0.22
STRN4-223	ENST00000602223	NRP1	O14786	923 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	N4BP3	O15049	544 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	BMP15	O95972	392 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	ALDH2	P05091	517 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	EDN1	P05305	212 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	CTSA	P10619	480 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	PDC	P20941	246 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	SCNN1G	P51170	649 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	ZP2	Q05996	745 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	DSC1	Q08554	894 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	PRPF4B	Q13523	1007 aa	Known RBP	13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	BMS1	Q14692	1282 aa	Known RBP	13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	RINT1	Q6NUQ1	792 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	C1orf186	Q6ZWK4	172 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	COLGALT2	Q8IYK4	626 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	DAW1	Q8N136	415 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	VPS52	Q8N1B4	723 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	GSTCD	Q8NEC7	633 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	INTS4	Q96HW7	963 aa	Known RBP	13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	AK8	Q96MA6	479 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	ZFP42	Q96MM3	310 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	KIFC3	Q9BVG8	833 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	RUSC1	Q9BVN2	902 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	VN1R3	Q9BXE9	311 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	NT5C3A	Q9H0P0	336 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	PDZD7	Q9H5P4	517 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	FAN1	Q9Y2M0	1017 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	IRAK3	Q9Y616	596 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	PLXNA3	P51805	1871 aa		13.69	□□□□□ -0.22
STRN4-223	ENST00000602223	VPS37C	A5D8V6	355 aa	Predicted RBP	13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	C19orf67	A6NJJ6	358 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	SLC26A4	O43511	780 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	HIP1R	O75146	1068 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	CXCL14	O95715	111 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	SRGAP2B	P0DMP2	458 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	AKAP5	P24588	427 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	EFNA5	P52803	228 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	PEX3	P56589	373 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	MAPK7	Q13164	816 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	GIT2	Q14161	759 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	TMEM119	Q4V9L6	283 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	ADHFE1	Q8IWW8	467 aa		13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	SYT2	Q8N9I0	419 aa	Predicted RBP	13.68	□□□□□ -0.22
STRN4-223	ENST00000602223	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms