RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 LAG3P18627 525 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 DDIT3P35638 169 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 SMTNP53814 917 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 SKIV2LQ15477 1246 aaKnown RBP14.1□□□□□ -0.15
USE1-209ENST00000601592 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 AGMOQ6ZNB7 445 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 SV2BQ7L1I2 683 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 DYMQ7RTS9 669 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 DHX58Q96C10 678 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 SPATA32Q96LK8 384 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 PLVAPQ9BX97 442 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
USE1-209ENST00000601592 GBP3Q9H0R5 595 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 PDZD7Q9H5P4 517 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
USE1-209ENST00000601592 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 MTCH2Q9Y6C9 303 aa14.1□□□□□ -0.15
USE1-209ENST00000601592 A0A1B0GUA9 196 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 C5orf67F2Z3F1 127 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 K7ENM7 598 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 ZC3H11AO75152 810 aaKnown RBP eCLIP14.09□□□□□ -0.15
USE1-209ENST00000601592 PBX3P40426 434 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 STRN3Q13033 797 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 PTPROQ16827 1216 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 ATF7IP2Q5U623 682 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 SHC4Q6S5L8 630 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 LRRC55Q6ZSA7 311 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
USE1-209ENST00000601592 KLHL23Q8NBE8 558 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 COLGALT1Q8NBJ5 622 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 SMG8Q8ND04 991 aaKnown RBP14.09□□□□□ -0.15
USE1-209ENST00000601592 ZNF558Q96NG5 402 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 MRPL4Q9BYD3 311 aaKnown RBP14.09□□□□□ -0.15
USE1-209ENST00000601592 CWH43Q9H720 699 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
USE1-209ENST00000601592 FAM13BQ9NYF5 915 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 ARHGAP28Q9P2N2 729 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 PARP2Q9UGN5 583 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 PCDHA7Q9UN72 937 aa14.09□□□□□ -0.15
USE1-209ENST00000601592 RBM19Q9Y4C8 960 aaKnown RBP14.09□□□□□ -0.15
USE1-209ENST00000601592 EYSQ5T1H1 3165 aa14.08□□□□□ -0.15
USE1-209ENST00000601592 GRM6O15303 877 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 OFD1O75665 1012 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 AKAP5P24588 427 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 MLH1P40692 756 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 NUCB2P80303 420 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 GIT2Q14161 759 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 NAALADL2Q58DX5 795 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 AXDND1Q5T1B0 1012 aaPredicted RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 NT5DC1Q5TFE4 455 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 EEF1DP3Q658K8 133 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 APBB1IPQ7Z5R6 666 aaPredicted RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 LEO1Q8WVC0 666 aaPredicted RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 SPIRE2Q8WWL2 714 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 MRPL38Q96DV4 380 aaKnown RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 BICD1Q96G01 975 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
USE1-209ENST00000601592 GAD1Q99259 594 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 TMEM134Q9H6X4 195 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 TBC1D13Q9NVG8 400 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 KLK14Q9P0G3 267 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 KCNG1Q9UIX4 513 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 RCOR1Q9UKL0 485 aa14.08□□□□□ -0.16
USE1-209ENST00000601592 MYMKA6NI61 221 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 H0YCG3 227 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 POMCP01189 267 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 ITGB1P05556 798 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 HARSP12081 509 aaKnown RBP14.07□□□□□ -0.16
USE1-209ENST00000601592 IDEP14735 1019 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 MATR3P43243 847 aaKnown RBP eCLIP14.07□□□□□ -0.16
USE1-209ENST00000601592 CSPP1Q1MSJ5 1256 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 DCAF4L1Q3SXM0 396 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 ZNF568Q3ZCX4 644 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 TAS1R3Q7RTX0 852 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 ZBTB33Q86T24 672 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 FAM178BQ8IXR5 827 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 TMEM161BQ8NDZ6 487 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 DDX12PQ92771 950 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 STAMQ92783 540 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 P2RX5Q93086 422 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 TARS2Q9BW92 718 aaKnown RBP14.07□□□□□ -0.16
USE1-209ENST00000601592 UBN1Q9NPG3 1134 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 LMCD1Q9NZU5 365 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 ANKFY1Q9P2R3 1169 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 GDAQ9Y2T3 454 aa14.07□□□□□ -0.16
USE1-209ENST00000601592 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
USE1-209ENST00000601592 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 NT5C1B-RDH14C9J2C7 533 aa14.06□□□□□ -0.16
USE1-209ENST00000601592 POLR2DO15514 142 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms