RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM167AQ96KS9 214 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 MBOAT7Q96N66 472 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 GABBR1Q9UBS5 961 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 PIN4Q9Y237 131 aaKnown RBP19.88■□□□□ 0.77
SSBP4-207ENST00000600244 MRPS17Q9Y2R5 130 aaKnown RBP19.88■□□□□ 0.77
SSBP4-207ENST00000600244 F5P12259 2224 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 FAM86B1E9PN63 330 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 IPO5O00410 1097 aaKnown RBP19.87■□□□□ 0.77
SSBP4-207ENST00000600244 ZNF862O60290 1169 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 FOSP01100 380 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-207ENST00000600244 FAM86B2P0C5J1 330 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 SREBF1P36956 1147 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 DRP2Q13474 957 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 LRSAM1Q6UWE0 723 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 PLA2G4DQ86XP0 818 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 TEX2Q8IWB9 1127 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 GPR65Q8IYL9 337 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 FAM193BQ96PV7 902 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-207ENST00000600244 KXD1Q9BQD3 176 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 PHF20Q9BVI0 1012 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 ANO3Q9BYT9 981 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 IL25Q9H293 177 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 FNIP2Q9P278 1114 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 PRG3Q9Y2Y8 225 aaPredicted RBP19.87■□□□□ 0.77
SSBP4-207ENST00000600244 PCDHB2Q9Y5E7 798 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 PCDHA10Q9Y5I2 948 aa19.87■□□□□ 0.77
SSBP4-207ENST00000600244 IGLV3-22A0A075B6J6 115 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 PSAPP07602 524 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 CYP21A2P08686 494 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 SFPQP23246 707 aaKnown RBP eCLIP19.86■□□□□ 0.77
SSBP4-207ENST00000600244 CDC42EP1Q00587 391 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 SMAP1Q8IYB5 467 aaPredicted RBP19.86■□□□□ 0.77
SSBP4-207ENST00000600244 COLGALT2Q8IYK4 626 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 IER2Q9BTL4 223 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 RSAD1Q9HA92 442 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 TAF6LQ9Y6J9 622 aa19.86■□□□□ 0.77
SSBP4-207ENST00000600244 A0A087WZ62 844 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 HIP1O00291 1037 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 POMCP01189 267 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 ZNF76P36508 570 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 PPP2R5DQ14738 602 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 ITFG1Q8TB96 612 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 FDXACB1Q9BRP7 624 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-207ENST00000600244 TMEM121BQ9BXQ6 578 aaPredicted RBP19.85■□□□□ 0.77
SSBP4-207ENST00000600244 RIC8AQ9NPQ8 531 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 HEBP1Q9NRV9 189 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.85■□□□□ 0.77
SSBP4-207ENST00000600244 NRBP2Q9NSY0 501 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 TBC1D22BQ9NU19 505 aa19.85■□□□□ 0.77
SSBP4-207ENST00000600244 CNTNAP2Q9UHC6 1331 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 OATP04181 439 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 TARBP2Q15633 366 aaKnown RBP19.84■□□□□ 0.77
SSBP4-207ENST00000600244 TYW1BQ6NUM6 668 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 HEATR3Q7Z4Q2 680 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 NCOA7Q8NI08 942 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 INO80BQ9C086 356 aaPredicted RBP19.84■□□□□ 0.77
SSBP4-207ENST00000600244 GTF3C3Q9Y5Q9 886 aa19.84■□□□□ 0.77
SSBP4-207ENST00000600244 E7EWF7 191 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 F8W810 466 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 KCNK5O95279 499 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 HNRNPA1P09651 372 aaKnown RBP eCLIP19.83■□□□□ 0.77
SSBP4-207ENST00000600244 CNR2P34972 360 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 OR1G1P47890 313 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 CCR3P51677 355 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 DSC1Q08554 894 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-207ENST00000600244 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.77
SSBP4-207ENST00000600244 CRYGNQ8WXF5 182 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 B3GALT6Q96L58 329 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 PLA2G2FQ9BZM2 168 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 RXFP3Q9NSD7 469 aa19.83■□□□□ 0.77
SSBP4-207ENST00000600244 U3KPZ7 1027 aaPredicted RBP19.83■□□□□ 0.77
SSBP4-207ENST00000600244 IGKV6-21A0A0C4DH24 114 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 ECI2O75521 394 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 SRSF5Q13243 272 aaKnown RBP19.82■□□□□ 0.76
SSBP4-207ENST00000600244 ZNF410Q86VK4 478 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 SKAP1Q86WV1 359 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 GLYCTKQ8IVS8 523 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 ZNF577Q9BSK1 485 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 LSM14BQ9BX40 385 aaKnown RBP19.82■□□□□ 0.76
SSBP4-207ENST00000600244 GPR62Q9BZJ7 368 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 FBXW11Q9UKB1 542 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 WASF3Q9UPY6 502 aa19.82■□□□□ 0.76
SSBP4-207ENST00000600244 WDR81Q562E7 1941 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 SRRM3A6NNA2 597 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CHURC1-FNTBB4DL54 471 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 RPL17P18621 184 aaKnown RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CXCL12P48061 93 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 FNTBP49356 437 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CLK2P49760 499 aaKnown RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 SATB1Q01826 763 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 RING1Q06587 406 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 SF3A2Q15428 464 aaKnown RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 AASDHQ4L235 1098 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 UBXN11Q5T124 520 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CATSPER4Q7RTX7 472 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 NPAS3Q8IXF0 933 aa19.81■□□□□ 0.76
SSBP4-207ENST00000600244 MB21D2Q8IYB1 491 aaPredicted RBP19.81■□□□□ 0.76
SSBP4-207ENST00000600244 CCDC82Q8N4S0 544 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms