RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 PBKQ96KB5 322 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 KREMEN1Q96MU8 473 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 KRT12Q99456 494 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 THAP2Q9H0W7 228 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 PLEKHA4Q9H4M7 779 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 NCANO14594 1321 aa23.39■■□□□ 1.34
GRAMD1A-212ENST00000600231 A0A0U1RQG5 324 aaPredicted RBP23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 ADM5C9JUS6 153 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 CEP104O60308 925 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 BUB1BO60566 1050 aaPredicted RBP23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 GLI1P08151 1106 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 ICAM3P32942 547 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 SYCE1Q8N0S2 351 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 VTI1AQ96AJ9 217 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 ACBD3Q9H3P7 528 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 SUCLA2Q9P2R7 463 aaPredicted RBP23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 USP20Q9Y2K6 914 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 SYNGAP1Q96PV0 1343 aa23.39■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAM193AP78312 1265 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 BRDTQ58F21 947 aaPredicted RBP23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 IFT74Q96LB3 600 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 MFSD14AQ96MC6 490 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 ARHGAP28Q9P2N2 729 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 TMEM59LQ9UK28 342 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 MAFBQ9Y5Q3 323 aaPredicted RBP23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 CSADQ9Y600 493 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 ZC3H4Q9UPT8 1303 aaKnown RBP23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 ALDH5A1P51649 535 aaPredicted RBP23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 TMEM8AQ9HCN3 771 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 ZNF302Q9NR11 478 aa23.38■■□□□ 1.33
GRAMD1A-212ENST00000600231 ANKRD62A6NC57 917 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 ATG7O95352 703 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 HSP90B2PQ58FF3 399 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 BICD1Q96G01 975 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 ACP6Q9NPH0 428 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 VPS18Q9P253 973 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 COQ4Q9Y3A0 265 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 ZSCAN5CA6NGD5 496 aaPredicted RBP23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 PHACTR2O75167 634 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 POLGP54098 1239 aaPredicted RBP23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 PPATQ06203 517 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 CYP24A1Q07973 514 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 EMC2Q15006 297 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 SND1Q7KZF4 910 aaKnown RBP eCLIP23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 RIOX2Q8IUF8 465 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAM71AQ8IYT1 594 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 RPUSD2Q8IZ73 545 aaKnown RBP23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 ACTRT1Q8TDG2 376 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 TMC2Q8TDI7 906 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 TAS1R2Q8TE23 839 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 TMEM143Q96AN5 459 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 ADAM21Q9UKJ8 722 aa23.37■■□□□ 1.33
GRAMD1A-212ENST00000600231 SGPL1O95470 568 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 DLATP10515 647 aaKnown RBP23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 GADL1Q6ZQY3 521 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 SULF1Q8IWU6 871 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 GPD1LQ8N335 351 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 ELMO3Q96BJ8 720 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 DCPSQ96C86 337 aaKnown RBP23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 HES6Q96HZ4 224 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 ADARB2Q9NS39 739 aaKnown RBP23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAN1Q9Y2M0 1017 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 SBF1O95248 1867 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 IRF6O14896 467 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 HEXIM1O94992 359 aaKnown RBP23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 AARSP49588 968 aaKnown RBP eCLIP23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 SV2AQ7L0J3 742 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAM213AQ9BRX8 229 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 AMFRQ9UKV5 643 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 COG5Q9UP83 839 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 LOC285556D6RIA3 1793 aa23.36■■□□□ 1.33
GRAMD1A-212ENST00000600231 CYP26A1O43174 497 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 FTLP02792 175 aaPredicted RBP23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 GPC3P51654 580 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 NCAPG2Q86XI2 1143 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 KLHL7Q8IXQ5 586 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 FBXL13Q8NEE6 735 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 HELQQ8TDG4 1101 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 EPS8L1Q8TE68 723 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 SCFD2Q8WU76 684 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 SPATC1LQ9H0A9 340 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 EPB41L5Q9HCM4 733 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 MED4Q9NPJ6 270 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 ESYT3A0FGR9 886 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 SYF2O95926 243 aaKnown RBP23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 OATP04181 439 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 GARTP22102 1010 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 GUCY2DQ02846 1103 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 PRPF4BQ13523 1007 aaKnown RBP23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 NOP9Q86U38 636 aaKnown RBP23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAM71BQ8TC56 605 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 SHC3Q92529 594 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 FAM84AQ96KN4 292 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 ISCUQ9H1K1 167 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 GDF3Q9NR23 364 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 RAB20Q9NX57 234 aa23.35■■□□□ 1.33
GRAMD1A-212ENST00000600231 SOWAHBA6NEL2 793 aa23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 UBA1P22314 1058 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-212ENST00000600231 TNFRSF8P28908 595 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms