RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 ECM1Q16610 540 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 LONRF3Q496Y0 759 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 KRT79Q5XKE5 535 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 DTHD1Q6ZMT9 781 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 TMEM173Q86WV6 379 aaPredicted RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 MRPL43Q8N983 215 aaKnown RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 FAM193BQ96PV7 902 aaPredicted RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 BHMT2Q9H2M3 363 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 FZD8Q9H461 694 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 DDX19AQ9NUU7 478 aaKnown RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 DNAJB4Q9UDY4 337 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
SIN3B-210ENST00000599880 KIAA1024Q9UPX6 916 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 GIT1Q9Y2X7 761 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 CITO14578 2027 aa12.08□□□□□ -0.48
SIN3B-210ENST00000599880 C2orf71A6NGG8 1288 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 ARL5CA6NH57 179 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 PI4K2BG5E9Z4 385 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 B4GALT5O43286 388 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 CTSAP10619 480 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 HOXB8P17481 243 aaPredicted RBP12.07□□□□□ -0.48
SIN3B-210ENST00000599880 SSTR3P32745 418 aaPredicted RBP12.07□□□□□ -0.48
SIN3B-210ENST00000599880 SLC11A1P49279 550 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 DSC1Q08554 894 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 CUL4AQ13619 759 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 CLUL1Q15846 466 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 MAPK6Q16659 721 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 ZNF280BQ86YH2 543 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 VN1R2Q8NFZ6 395 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 BSNDQ8WZ55 320 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 IFT74Q96LB3 600 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 CCDC113Q9H0I3 377 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 MYH15Q9Y2K3 1946 aa12.07□□□□□ -0.48
SIN3B-210ENST00000599880 MTCL1Q9Y4B5 1905 aaKnown RBP12.07□□□□□ -0.48
SIN3B-210ENST00000599880 N4BP3O15049 544 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 B4GALT3O60512 393 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 DDHD2O94830 711 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 POMCP01189 267 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 ALDH2P05091 517 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 MLH1P40692 756 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 EFNA5P52803 228 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 IL17AQ16552 155 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 HYIQ5T013 277 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 BRAPQ7Z569 592 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 COLGALT2Q8IYK4 626 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 DEPTORQ8TB45 409 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 BCL7CQ8WUZ0 217 aaPredicted RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 SUSD6Q92537 303 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 CASP10Q92851 521 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 GAD1Q99259 594 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 NT5C3AQ9H0P0 336 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 DNM3Q9UQ16 869 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 FAN1Q9Y2M0 1017 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 HES2Q9Y543 173 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 HCFC2Q9Y5Z7 792 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 PHLPP2Q6ZVD8 1323 aa12.06□□□□□ -0.48
SIN3B-210ENST00000599880 PDCD11Q14690 1871 aaKnown RBP12.06□□□□□ -0.48
SIN3B-210ENST00000599880 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 ACKR2O00590 384 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 NRP1O14786 923 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 SLC26A4O43511 780 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 NPTXRO95502 500 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 BMP15O95972 392 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 PRKCBP05771 671 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 ALADP13716 330 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 SCNN1GP51170 649 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 RBM10P98175 930 aaKnown RBP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 GRIK3Q13003 919 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 PRPF4BQ13523 1007 aaKnown RBP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 GSTCDQ8NEC7 633 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 AK8Q96MA6 479 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 DRC1Q96MC2 740 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 ADPGKQ9BRR6 497 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 MMTAG2Q9BU76 263 aaKnown RBP12.05□□□□□ -0.48
SIN3B-210ENST00000599880 TIPINQ9BVW5 301 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 VN1R3Q9BXE9 311 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 PDZD7Q9H5P4 517 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 EPHX3Q9H6B9 360 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 C17orf75Q9HAS0 396 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 PLXNA3P51805 1871 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 C2orf16Q68DN1 1984 aa12.05□□□□□ -0.48
SIN3B-210ENST00000599880 E9PMD0 336 aa12.04□□□□□ -0.48
SIN3B-210ENST00000599880 GPR37L1O60883 481 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms