RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TTC26A0AVF1 554 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 PGM1P36871 562 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 ARSEP51690 589 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 BCAR1P56945 870 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 ACCSLQ4AC99 568 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 SH3KBP1Q96B97 665 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 SIK2Q9H0K1 926 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.54□□□□□ -0.4
SCN8A-208ENST00000599343 ADGRG1Q9Y653 693 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 ABCC2Q92887 1545 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 VCAM1P19320 739 aa12.54□□□□□ -0.4
SCN8A-208ENST00000599343 TRIM49P0CI25 452 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TRIM49CP0CI26 452 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CARSP49589 748 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 FAM102AQ5T9C2 384 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 GLYCTKQ8IVS8 523 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ZCWPW1Q9H0M4 648 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 PHKA2P46019 1235 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TRPC1P48995 793 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 MRPS15P82914 257 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 SUSD4Q5VX71 490 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TMEM179Q6ZVK1 233 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 FMR1NBQ8N0W7 255 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TMEM47Q9BQJ4 181 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 EHD2Q9NZN4 543 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ARHGAP26Q9UNA1 814 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF185O15231 689 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 IL10P22301 178 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 DMC1Q14565 340 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CDKL3Q8IVW4 592 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ASIC4Q96FT7 647 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CFAP73A6NFT4 308 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 FAM187AA6NFU0 413 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 FOXN1O15353 648 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ASAP2O43150 1006 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 LCP1P13796 627 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 IREB2P48200 963 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ATXN3P54252 364 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CACNB2Q08289 660 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 HIC1Q14526 733 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 EFHC2Q5JST6 749 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 PATL1Q86TB9 770 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 MXD3Q9BW11 206 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 WDR62O43379 1518 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CFAP65Q6ZU64 1925 aaKnown RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 RASSF10A6NK89 507 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 CCDC22O60826 627 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 MYO1DO94832 1006 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 SOX11P35716 441 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 STXBP2Q15833 593 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TMC4Q7Z404 712 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 POLR3FQ9H1D9 316 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF302Q9NR11 478 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 AIPL1Q9NZN9 384 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
SCN8A-208ENST00000599343 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
SCN8A-208ENST00000599343 ADGRL2O95490 1459 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 KRT7P08729 469 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 BTNL9Q6UXG8 535 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 NUP93Q8N1F7 819 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.4
SCN8A-208ENST00000599343 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 TRIM45Q9H8W5 580 aaPredicted RBP12.52□□□□□ -0.4
SCN8A-208ENST00000599343 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.4
SCN8A-208ENST00000599343 DONSONQ9NYP3 566 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 DAB1O75553 588 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 CDH6P55285 790 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 MTF1Q14872 753 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 SWSAP1Q6NVH7 229 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 DGKHQ86XP1 1220 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 TRMT2AQ8IZ69 625 aaKnown RBP12.52□□□□□ -0.4
SCN8A-208ENST00000599343 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.4
SCN8A-208ENST00000599343 LCMT1Q9UIC8 334 aa12.52□□□□□ -0.4
SCN8A-208ENST00000599343 FCER1AP12319 257 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.41
SCN8A-208ENST00000599343 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms