RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC11A1P49279 550 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 SLC26A2P50443 739 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 NPY5RQ15761 445 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 MLF2Q15773 248 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 ZNF484Q5JVG2 852 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 FAM160B1Q5W0V3 765 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 PPP1R18Q6NYC8 613 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 PDXDC2PQ6P474 469 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 PRR23BQ6ZRT6 265 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 SPATA31D4Q6ZUB0 917 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 CCDC60Q8IWA6 550 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 BORCS6Q96GS4 357 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 C8orf76Q96K31 380 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 RPP25Q9BUL9 199 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 PHF20Q9BVI0 1012 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 VPS54Q9P1Q0 977 aa15.58■□□□□ 0.08
SHKBP1-218ENST00000598907 A0A0U1RQF3 1178 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 B4GALT3O60512 393 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 XBP1P17861 261 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 ITGB3BPQ13352 177 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 N4BP2L1Q5TBK1 243 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 HEATR3Q7Z4Q2 680 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 MAP7D2Q96T17 732 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 ZMYND12Q9H0C1 365 aa15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 MRPL17Q9NRX2 175 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-218ENST00000598907 STX6O43752 255 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 CCNE2O96020 404 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 GLUD1P00367 558 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 URODP06132 367 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 PRR23CQ6ZRP0 262 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 TEX2Q8IWB9 1127 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 LRRC71Q8N4P6 559 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 DAGLBQ8NCG7 672 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 CCDC148Q8NFR7 591 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 CCDC12Q8WUD4 166 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 FGF14Q92915 247 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 ZNF707Q96C28 371 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 PSTPIP2Q9H939 334 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 LTB4R2Q9NPC1 389 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 ZNF302Q9NR11 478 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 SEMA4GQ9NTN9 838 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 CIZ1Q9ULV3 898 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 NFASCO94856 1347 aa15.56■□□□□ 0.08
SHKBP1-218ENST00000598907 MEIS3P2A8K0S8 358 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 M0R2N6 131 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 MAFGO15525 162 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 PROS1P07225 676 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 ADH1AP07327 375 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 EIF4BP23588 611 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 NAPAP54920 295 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 NOMO2Q5JPE7 1267 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 LAIR1Q6GTX8 287 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 GALNT17Q6IS24 598 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 PARM1Q6UWI2 310 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 GLB1LQ6UWU2 654 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 NELL1Q92832 810 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 MXRA8Q9BRK3 442 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 DDX23Q9BUQ8 820 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 ADAMTS10Q9H324 1103 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 ZMIZ1Q9ULJ6 1067 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 PCDHA6Q9UN73 950 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 ZDHHC9Q9Y397 364 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 PCDHA8Q9Y5H6 950 aa15.55■□□□□ 0.08
SHKBP1-218ENST00000598907 SMCO2A6NFE2 343 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 C1QTNF9BB2RNN3 333 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 ADAMTS3O15072 1205 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 TEX28O15482 410 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 C1QTNF9P0C862 333 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 TARSP26639 723 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 FOSBP53539 338 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 NLRP5P59047 1200 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 GUCY1B3Q02153 619 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 PRKCQQ04759 706 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 PKP1Q13835 747 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 TRIM29Q14134 588 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 SLC44A4Q53GD3 710 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 ZBTB41Q5SVQ8 909 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 IL31Q6EBC2 164 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 SWSAP1Q6NVH7 229 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 ZNF280BQ86YH2 543 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 PGBD1Q96JS3 809 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 AGO4Q9HCK5 861 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 RIC8AQ9NPQ8 531 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 PRMT8Q9NR22 394 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 SPEGQ15772 3267 aa15.54■□□□□ 0.08
SHKBP1-218ENST00000598907 IGKV6D-21A0A0A0MT36 114 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 LILRB3O75022 631 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 ATG7O95352 703 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 ATP4AP20648 1035 aa15.53■□□□□ 0.08
SHKBP1-218ENST00000598907 GNA11P29992 359 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms