RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 ARHGAP28Q9P2N2 729 aa25.14■■□□□ 1.62
IRF3-220ENST00000598108 FNDC1Q4ZHG4 1894 aaPredicted RBP25.14■■□□□ 1.61
IRF3-220ENST00000598108 A0A087X0B3 334 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 K7ERI5 159 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 SLC16A4O15374 487 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 B4GALT3O60512 393 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 YEATS4O95619 227 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 PLS3P13797 630 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 TCEAL5Q5H9L2 206 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 ZNF280BQ86YH2 543 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 ZNF558Q96NG5 402 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 REEP2Q9BRK0 252 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 PANK2Q9BZ23 570 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 TRIM6Q9C030 488 aaPredicted RBP25.13■■□□□ 1.61
IRF3-220ENST00000598108 NRDE2Q9H7Z3 1164 aa25.13■■□□□ 1.61
IRF3-220ENST00000598108 SPTBN5Q9NRC6 3674 aaKnown RBP25.12■■□□□ 1.61
IRF3-220ENST00000598108 PPP6R2O75170 966 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 BRD1O95696 1058 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 AKAP5P24588 427 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 IRS1P35568 1242 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 BCAR1P56945 870 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 DNM1Q05193 864 aaKnown RBP25.12■■□□□ 1.61
IRF3-220ENST00000598108 GIT2Q14161 759 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 SPIRE2Q8WWL2 714 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 LARP4BQ92615 738 aaKnown RBP25.12■■□□□ 1.61
IRF3-220ENST00000598108 GAD1Q99259 594 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 TMEM134Q9H6X4 195 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 MIOSQ9NXC5 875 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 CCDC39Q9UFE4 941 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 MYO7AQ13402 2215 aa25.12■■□□□ 1.61
IRF3-220ENST00000598108 ARL5CA6NH57 179 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 NT5C1B-RDH14C9J2C7 533 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 N4BP3O15049 544 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 DDHD2O94830 711 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 POMCP01189 267 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 CSPP1Q1MSJ5 1256 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 TMEM132AQ24JP5 1023 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 TIGD5Q53EQ6 642 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 RRAGBQ5VZM2 374 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 SLC39A11Q8N1S5 342 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 TMEM161BQ8NDZ6 487 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 RSPH1Q8WYR4 309 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 CHAMP1Q96JM3 812 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 ZFP42Q96MM3 310 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 NSUN3Q9H649 340 aaKnown RBP25.11■■□□□ 1.61
IRF3-220ENST00000598108 UBN1Q9NPG3 1134 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 DNAJB4Q9UDY4 337 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 RBM19Q9Y4C8 960 aaKnown RBP25.11■■□□□ 1.61
IRF3-220ENST00000598108 PCDHGC5Q9Y5F6 944 aa25.11■■□□□ 1.61
IRF3-220ENST00000598108 PLCB3Q01970 1234 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 RNASELQ05823 741 aaKnown RBP25.1■■□□□ 1.61
IRF3-220ENST00000598108 ATF7IP2Q5U623 682 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 URGCPQ8TCY9 931 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 GBP3Q9H0R5 595 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 SPG21Q9NZD8 308 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 STK17AQ9UEE5 414 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 GIT1Q9Y2X7 761 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 RALGAPA2Q2PPJ7 1873 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 XIRP2A4UGR9 3374 aa25.1■■□□□ 1.61
IRF3-220ENST00000598108 NLRC5Q86WI3 1866 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 INPPL1O15357 1258 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 ZC3H11AO75152 810 aaKnown RBP eCLIP25.09■■□□□ 1.611e-11■□□□□ 11.2
IRF3-220ENST00000598108 GALTP07902 379 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 TXLNAP40222 546 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 MLH1P40692 756 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 ERVFC1P60507 584 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 TFF2Q03403 129 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 AXDND1Q5T1B0 1012 aaPredicted RBP25.09■■□□□ 1.61
IRF3-220ENST00000598108 TMEM173Q86WV6 379 aaPredicted RBP25.09■■□□□ 1.61
IRF3-220ENST00000598108 GSTCDQ8NEC7 633 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 ACO2Q99798 780 aaKnown RBP25.09■■□□□ 1.61
IRF3-220ENST00000598108 TARS2Q9BW92 718 aaKnown RBP25.09■■□□□ 1.61
IRF3-220ENST00000598108 KLK14Q9P0G3 267 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 THEGQ9P2T0 379 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 PARP2Q9UGN5 583 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 ODF2LQ9ULJ1 636 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 PHLPP2Q6ZVD8 1323 aa25.09■■□□□ 1.61
IRF3-220ENST00000598108 MAPTP10636 758 aaKnown RBP25.08■■□□□ 1.61
IRF3-220ENST00000598108 SLC11A1P49279 550 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 ALDH7A1P49419 539 aaKnown RBP25.08■■□□□ 1.61
IRF3-220ENST00000598108 ZNF131P52739 623 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 UBE3AQ05086 875 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 ATL3Q6DD88 541 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 SHC4Q6S5L8 630 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 MRPS27Q92552 414 aaKnown RBP25.08■■□□□ 1.61
IRF3-220ENST00000598108 PTPRHQ9HD43 1115 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 SNTG2Q9NY99 539 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 KANSL3Q9P2N6 904 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 TNFSF13BQ9Y275 285 aa25.08■■□□□ 1.61
IRF3-220ENST00000598108 MYMKA6NI61 221 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 CUTAO60888 179 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 KRT18P05783 430 aaKnown RBP25.07■■□□□ 1.6
IRF3-220ENST00000598108 PPM1AP35813 382 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 SCNN1GP51170 649 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 SMTNP53814 917 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 BECN1Q14457 450 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 CCDC73Q6ZRK6 1079 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 ADGRD2Q7Z7M1 963 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 HACE1Q8IYU2 909 aa25.07■■□□□ 1.6
IRF3-220ENST00000598108 MYCT1Q8N699 235 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms