RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 BCL7CQ8WUZ0 217 aaPredicted RBP16.69■□□□□ 0.26
LIG1-215ENST00000597901 BSNDQ8WZ55 320 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
LIG1-215ENST00000597901 GAD1Q99259 594 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 TMEM175Q9BSA9 504 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 DDX19AQ9NUU7 478 aaKnown RBP16.69■□□□□ 0.26
LIG1-215ENST00000597901 FAN1Q9Y2M0 1017 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 HCN4Q9Y3Q4 1203 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
LIG1-215ENST00000597901 BRWD1Q9NSI6 2320 aa16.69■□□□□ 0.26
LIG1-215ENST00000597901 ARL5CA6NH57 179 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 PP2D1A8MPX8 630 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 INPPL1O15357 1258 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 FAM187BQ17R55 369 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 KRT79Q5XKE5 535 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 SMRP1Q8NCR6 262 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 SNX29Q8TEQ0 813 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 TRIM6Q9C030 488 aaPredicted RBP16.68■□□□□ 0.26
LIG1-215ENST00000597901 PRMT7Q9NVM4 692 aaPredicted RBP16.68■□□□□ 0.26
LIG1-215ENST00000597901 DNM3Q9UQ16 869 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
LIG1-215ENST00000597901 E9PMD0 336 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 NRP1O14786 923 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 CLASP2O75122 1294 aaKnown RBP16.67■□□□□ 0.26
LIG1-215ENST00000597901 NPTXRO95502 500 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 CTSAP10619 480 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 ALADP13716 330 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 CDCA2Q69YH5 1023 aaPredicted RBP16.67■□□□□ 0.26
LIG1-215ENST00000597901 ANKRD54Q6NXT1 300 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 LLGL2Q6P1M3 1020 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 SLC27A1Q6PCB7 646 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 AUTS2Q8WXX7 1259 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 PRIMPOLQ96LW4 560 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
LIG1-215ENST00000597901 APOL6Q9BWW8 343 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 ZBP1Q9H171 429 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 C2orf40Q9H1Z8 148 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 S1PR5Q9H228 398 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 USP15Q9Y4E8 981 aaPredicted RBP16.67■□□□□ 0.26
LIG1-215ENST00000597901 IRAK3Q9Y616 596 aa16.67■□□□□ 0.26
LIG1-215ENST00000597901 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 TTLL13PA6NNM8 815 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 ACKR2O00590 384 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 SRGAP2BP0DMP2 458 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 AKAP5P24588 427 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 CA8P35219 290 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 MLH1P40692 756 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 NAMPTP43490 491 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 ATP2C1P98194 919 aaPredicted RBP16.66■□□□□ 0.26
LIG1-215ENST00000597901 PPP2R5AQ15172 486 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 MAPK6Q16659 721 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 SYCE2Q6PIF2 218 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 COLGALT2Q8IYK4 626 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 HACE1Q8IYU2 909 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 DEPTORQ8TB45 409 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 KIFAP3Q92845 792 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 IFT74Q96LB3 600 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 ZFP42Q96MM3 310 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 MMTAG2Q9BU76 263 aaKnown RBP16.66■□□□□ 0.26
LIG1-215ENST00000597901 VN1R3Q9BXE9 311 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 NXF3Q9H4D5 531 aaKnown RBP16.66■□□□□ 0.26
LIG1-215ENST00000597901 USP20Q9Y2K6 914 aa16.66■□□□□ 0.26
LIG1-215ENST00000597901 GPR37L1O60883 481 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 HOXB8P17481 243 aaPredicted RBP16.65■□□□□ 0.26
LIG1-215ENST00000597901 SCNN1GP51170 649 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 PRPF4BQ13523 1007 aaKnown RBP16.65■□□□□ 0.26
LIG1-215ENST00000597901 GIT2Q14161 759 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 GSTCDQ8NEC7 633 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 SUSD6Q92537 303 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 CASP10Q92851 521 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 LRFN3Q9BTN0 628 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 CCDC113Q9H0I3 377 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 KLK14Q9P0G3 267 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 PARP2Q9UGN5 583 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 HCFC2Q9Y5Z7 792 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 PLXNA4Q9HCM2 1894 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 MUC3AQ02505 3323 aa16.65■□□□□ 0.26
LIG1-215ENST00000597901 BDP1A6H8Y1 2624 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.64■□□□□ 0.25
LIG1-215ENST00000597901 LILRB3O75022 631 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 PRKCBP05771 671 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 LIG1P18858 919 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 OR1G1P47890 313 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 DSC1Q08554 894 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 CUL4AQ13619 759 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 TAS1R1Q7RTX1 841 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 APOL5Q9BWW9 433 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 PDZD7Q9H5P4 517 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 STK39Q9UEW8 545 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 PRG3Q9Y2Y8 225 aaPredicted RBP16.64■□□□□ 0.25
LIG1-215ENST00000597901 NCOR1O75376 2440 aa16.64■□□□□ 0.25
LIG1-215ENST00000597901 VWA3AA6NCI4 1184 aa16.63■□□□□ 0.25
LIG1-215ENST00000597901 K7ERI5 159 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms