RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 ITGA4P13612 1032 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 GLRA2P23416 452 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 MCM7P33993 719 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 AFF1P51825 1210 aaKnown RBP19.87■□□□□ 0.77
HOMER3-208ENST00000595756 ZXDAP98168 799 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 NCBP1Q09161 790 aaKnown RBP19.87■□□□□ 0.77
HOMER3-208ENST00000595756 PTPN14Q15678 1187 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 CES5AQ6NT32 575 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 AUTS2Q8WXX7 1259 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 MFSD14AQ96MC6 490 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 FAM193BQ96PV7 902 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-208ENST00000595756 APOL5Q9BWW9 433 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 EIF2AQ9BY44 585 aaKnown RBP19.87■□□□□ 0.77
HOMER3-208ENST00000595756 CSRNP2Q9H175 543 aa19.87■□□□□ 0.77
HOMER3-208ENST00000595756 FOXP1Q9H334 677 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-208ENST00000595756 KMT2EQ8IZD2 1858 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 USO1O60763 962 aaKnown RBP19.86■□□□□ 0.77
HOMER3-208ENST00000595756 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 PDCP20941 246 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 TRIM67Q6ZTA4 783 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 BMP8AQ7Z5Y6 402 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 PPFIBP1Q86W92 1011 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 TMEM87AQ8NBN3 555 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 MCPH1Q8NEM0 835 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 PIGOQ8TEQ8 1089 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 CPB2Q96IY4 423 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 POLR3FQ9H1D9 316 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-208ENST00000595756 DBR1Q9UK59 544 aaKnown RBP19.86■□□□□ 0.77
HOMER3-208ENST00000595756 NR2E1Q9Y466 385 aa19.86■□□□□ 0.77
HOMER3-208ENST00000595756 ARL5CA6NH57 179 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 POMCP01189 267 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 OR52Z1P0C646 297 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 ARF4P18085 180 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-208ENST00000595756 HOXD11P31277 338 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-208ENST00000595756 MLH1P40692 756 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 MTHFRP42898 656 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 GNL2Q13823 731 aaKnown RBP19.85■□□□□ 0.77
HOMER3-208ENST00000595756 KIAA1841Q6NSI8 718 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 CATSPER3Q86XQ3 398 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 HACE1Q8IYU2 909 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 RIPOR3Q96MK2 946 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 POLR3CQ9BUI4 534 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-208ENST00000595756 FAN1Q9Y2M0 1017 aa19.85■□□□□ 0.77
HOMER3-208ENST00000595756 PIEZO1Q92508 2521 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 TMEM221A6NGB7 291 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 H3BQV1 296 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 M0R296 226 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 NRP1O14786 923 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 MED24O75448 989 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 ALDH2P05091 517 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 HSP90AA1P07900 732 aaKnown RBP19.84■□□□□ 0.77
HOMER3-208ENST00000595756 EPCAMP16422 314 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 ATP2B1P20020 1258 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 DSC1Q08554 894 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 PTPN21Q16825 1174 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 LARP1BQ659C4 914 aaKnown RBP19.84■□□□□ 0.77
HOMER3-208ENST00000595756 CDCA2Q69YH5 1023 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-208ENST00000595756 SLC27A1Q6PCB7 646 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 COLGALT2Q8IYK4 626 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 ERMNQ8TAM6 284 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 SLC22A17Q8WUG5 538 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 PRIMPOLQ96LW4 560 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 HERC2P3Q9BVR0 1158 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 EMILIN2Q9BXX0 1053 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 TRIM6Q9C030 488 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-208ENST00000595756 POMKQ9H5K3 350 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 MARCH5Q9NX47 278 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 CDH22Q9UJ99 828 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 GIT1Q9Y2X7 761 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 PLXNA3P51805 1871 aa19.84■□□□□ 0.77
HOMER3-208ENST00000595756 SOD2P04179 222 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 PDIA4P13667 645 aaKnown RBP19.83■□□□□ 0.77
HOMER3-208ENST00000595756 MUTP22033 750 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 RPA1P27694 616 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 TRAPPC10P48553 1259 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 SIGLEC14Q08ET2 396 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 HAUS3Q68CZ6 603 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 NOSTRINQ8IVI9 506 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 NACC1Q96RE7 527 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 GAD1Q99259 594 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 RNF39Q9H2S5 420 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 NXF3Q9H4D5 531 aaKnown RBP19.83■□□□□ 0.77
HOMER3-208ENST00000595756 SFXN1Q9H9B4 322 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 PRMT7Q9NVM4 692 aaPredicted RBP19.83■□□□□ 0.77
HOMER3-208ENST00000595756 HES2Q9Y543 173 aa19.83■□□□□ 0.77
HOMER3-208ENST00000595756 A0A1B0GUA9 196 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 LRRIQ4A6NIV6 560 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 B4GALT5O43286 388 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 LILRB3O75022 631 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 URODP06132 367 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 SCNN1GP51170 649 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 BECN1Q14457 450 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 RARS2Q5T160 578 aaKnown RBP19.82■□□□□ 0.76
HOMER3-208ENST00000595756 POTEGQ6S5H5 508 aa19.82■□□□□ 0.76
HOMER3-208ENST00000595756 RNF168Q8IYW5 571 aaPredicted RBP19.82■□□□□ 0.76
HOMER3-208ENST00000595756 ZFP42Q96MM3 310 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms