RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ADGRE1Q14246 886 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 EPC2Q52LR7 807 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 SLC27A1Q6PCB7 646 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 LRRC55Q6ZSA7 311 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 GRAMD1CQ8IYS0 662 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 CCDC51Q96ER9 411 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 FIZ1Q96SL8 496 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 NTPCRQ9BSD7 190 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 TARS2Q9BW92 718 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 TMEM134Q9H6X4 195 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 LARSQ9P2J5 1176 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 KCNH3Q9ULD8 1083 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 INPP5FQ9Y2H2 1132 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 CHD7Q9P2D1 2997 aa15.17■□□□□ 0.02
SHKBP1-207ENST00000595631 K7ENM7 598 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 N4BP3O15049 544 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 TRAK2O60296 914 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 SKIP12755 728 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 IDEP14735 1019 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 CMA1P23946 247 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 AFF1P51825 1210 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 SMTNP53814 917 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 ATF7IP2Q5U623 682 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 HAUS6Q7Z4H7 955 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 ABI1Q8IZP0 508 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 FSIP1Q8NA03 581 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 IQUBQ8NA54 791 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 CLP1Q92989 425 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 CWH43Q9H720 699 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 KBTBD4Q9NVX7 518 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 TBC1D7Q9P0N9 293 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 HPSEQ9Y251 543 aa15.16■□□□□ 0.02
SHKBP1-207ENST00000595631 HOXA2O43364 376 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ACTN4O43707 911 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 B4GALT3O60512 393 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 LPXNO60711 386 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 OFD1O75665 1012 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ITGA4P13612 1032 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 FOSL2P15408 326 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 AKAP5P24588 427 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 PBX3P40426 434 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 AFMP43652 599 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 NDUFA8P51970 172 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ZC2HC1CQ53FD0 456 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 SPOUT1Q5T280 376 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ZBTB33Q86T24 672 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 HPS3Q969F9 1004 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 PGBD4Q96DM1 585 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ZBTB45Q96K62 511 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 ACO2Q99798 780 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 MRPL4Q9BYD3 311 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 CXCL16Q9H2A7 254 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 BLZF1Q9H2G9 400 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 CUEDC2Q9H467 287 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 RSAD1Q9HA92 442 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 KLK14Q9P0G3 267 aa15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 PRRC2BQ5JSZ5 2229 aaKnown RBP15.15■□□□□ 0.02
SHKBP1-207ENST00000595631 IGFBP4P22692 258 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 BMPR1AP36894 532 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 MLH1P40692 756 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 STRN3Q13033 797 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 NOMO2Q5JPE7 1267 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 GLB1LQ6UWU2 654 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 LRRC43Q8N309 656 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 CEP120Q8N960 986 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 MRPS27Q92552 414 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 ZFP42Q96MM3 310 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 GAD1Q99259 594 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 GAS2L1Q99501 681 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 TRIM9Q9C026 710 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 CDT1Q9H211 546 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 MIOSQ9NXC5 875 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 SNTG2Q9NY99 539 aa15.14■□□□□ 0.01
SHKBP1-207ENST00000595631 FAM237AA0A1B0GTK4 181 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 A0A1W2PQ27 194 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 A0A1W2PQ64 194 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 A0A1W2PQD8 194 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 FRMD3A2A2Y4 597 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 ABLIM1O14639 778 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 CSPG5O95196 566 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 POMCP01189 267 aa15.13■□□□□ 0.01
SHKBP1-207ENST00000595631 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms