RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 BACH1O14867 736 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 LAMTOR5O43504 91 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 ATG7O95352 703 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 TGM1P22735 817 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 PPM1JQ5JR12 505 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 BCL7CQ8WUZ0 217 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-202ENST00000595242 RRP36Q96EU6 259 aaKnown RBP14.32□□□□□ -0.12
SCAF1-202ENST00000595242 MYADMQ96S97 322 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
SCAF1-202ENST00000595242 SLC2A4RGQ9NR83 387 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 GJB4Q9NTQ9 266 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 SMG5Q9UPR3 1016 aaKnown RBP14.32□□□□□ -0.12
SCAF1-202ENST00000595242 FRYQ5TBA9 3013 aa14.32□□□□□ -0.12
SCAF1-202ENST00000595242 CCDC195A0A1B0GUA6 201 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 SPDYE3A6NKU9 549 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 C22orf31O95567 290 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CNPP09543 421 aaKnown RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 NLRP11P59045 1033 aaKnown RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 STARD6P59095 220 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CSTF1Q05048 431 aaKnown RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CCDC173Q0VFZ6 552 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 UVSSAQ2YD98 709 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 ADALQ6DHV7 355 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 ENGASEQ8NFI3 743 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 SHDQ96IW2 340 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 MXRA8Q9BRK3 442 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 VN1R3Q9BXE9 311 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 BCO2Q9BYV7 579 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 EPC1Q9H2F5 836 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 DACT1Q9NYF0 836 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 SEC63Q9UGP8 760 aaKnown RBP14.31□□□□□ -0.12
SCAF1-202ENST00000595242 PCDHA6Q9UN73 950 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 PCDHA8Q9Y5H6 950 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 CLUHO75153 1309 aa14.31□□□□□ -0.12
SCAF1-202ENST00000595242 PKD1L2Q7Z442 2459 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 PPP6R2O75170 966 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 SSBP05455 408 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCAF1-202ENST00000595242 GALTP07902 379 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 EIF4BP23588 611 aaKnown RBP14.3□□□□□ -0.12
SCAF1-202ENST00000595242 KIF5BP33176 963 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 ITGB3BPQ13352 177 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-202ENST00000595242 SLC39A14Q15043 492 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 UBE2SQ16763 222 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 NOSTRINQ8IVI9 506 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-202ENST00000595242 ZBTB44Q8NCP5 570 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 PDLIM2Q96JY6 352 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 PARD6AQ9NPB6 346 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 ZNF302Q9NR11 478 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 MAN1C1Q9NR34 630 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 ZSCAN32Q9NX65 697 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 PCDHA7Q9UN72 937 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 CLIC4Q9Y696 253 aa14.3□□□□□ -0.12
SCAF1-202ENST00000595242 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-202ENST00000595242 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 KANSL1LA0AUZ9 987 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 SPTLC2O15270 562 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 LILRB5O75023 590 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 NR1I2O75469 434 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 CCNE2O96020 404 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 LAMP2P13473 410 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 XBP1P17861 261 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 ATP4AP20648 1035 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 FAM160A1Q05DH4 1040 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 STK38Q15208 465 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 PTPAQ15257 358 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 SAFBQ15424 915 aaKnown RBP eCLIP14.29□□□□□ -0.12
SCAF1-202ENST00000595242 PDXDC2PQ6P474 469 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 ABHD15Q6UXT9 468 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 CYP26C1Q6V0L0 522 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 CCDC60Q8IWA6 550 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-202ENST00000595242 DIS3L2Q8IYB7 885 aaKnown RBP14.29□□□□□ -0.12
SCAF1-202ENST00000595242 ST13P5Q8NFI4 369 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-202ENST00000595242 PHF20Q9BVI0 1012 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 ADAMTS10Q9H324 1103 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 AGO4Q9HCK5 861 aaKnown RBP14.29□□□□□ -0.12
SCAF1-202ENST00000595242 TBC1D13Q9NVG8 400 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 AKT3Q9Y243 479 aa14.29□□□□□ -0.12
SCAF1-202ENST00000595242 TDRD15B5MCY1 1934 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 ANHXE9PGG2 379 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 DDX39AO00148 427 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 INPPL1O15357 1258 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 LILRB3O75022 631 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 MYBP10242 640 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 GNAQP50148 359 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 CLCN3P51790 818 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 AKAP17AQ02040 695 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 CEBPZQ03701 1054 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
SCAF1-202ENST00000595242 DMWDQ09019 674 aa14.28□□□□□ -0.12
SCAF1-202ENST00000595242 SNW1Q13573 536 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms