RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 EXOC3O60645 756 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 COPB2P35606 906 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 CYP2J2P51589 502 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SNRPFP62306 86 aaKnown RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 IFI35P80217 286 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 ADAT2Q7Z6V5 191 aaKnown RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 GBP7Q8N8V2 638 aaPredicted RBP14.25□□□□□ -0.13
VRK3-209ENST00000594948 PIGOQ8TEQ8 1089 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 KRT35Q92764 455 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SERPINB12Q96P63 405 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 EHMT1Q9H9B1 1298 aa14.25□□□□□ -0.13
VRK3-209ENST00000594948 SNX3O60493 162 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 NDUFB10O96000 172 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 BMP3P12645 472 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 GYS1P13807 737 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 COMTP21964 271 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 CRKP46108 304 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 FKBP1AP62942 108 aaKnown RBP14.24□□□□□ -0.13
VRK3-209ENST00000594948 NFIAQ12857 509 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 TLDC1Q6P9B6 456 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 SYDE1Q6ZW31 735 aaPredicted RBP14.24□□□□□ -0.13
VRK3-209ENST00000594948 TPH2Q8IWU9 490 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 PRMT1Q99873 361 aaKnown RBP14.24□□□□□ -0.13
VRK3-209ENST00000594948 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 ZC3H12CQ9C0D7 883 aaKnown RBP14.24□□□□□ -0.13
VRK3-209ENST00000594948 TMEM206Q9H813 350 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 VEZTQ9HBM0 779 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 NOD2Q9HC29 1040 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 DONSONQ9NYP3 566 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 UVRAGQ9P2Y5 699 aa14.24□□□□□ -0.13
VRK3-209ENST00000594948 COL2A1P02458 1487 aaPredicted RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 A0A1B0GUA9 196 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 O00370 1275 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 CYP1A2P05177 515 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 PPP1R7Q15435 360 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 SIX1Q15475 284 aaPredicted RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 USH1GQ495M9 461 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 ODR4Q5SWX8 454 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 HIBCHQ6NVY1 386 aaPredicted RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 RPUSD2Q8IZ73 545 aaKnown RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 ZDHHC14Q8IZN3 488 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 CYP2W1Q8TAV3 490 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 EPS8L3Q8TE67 593 aaKnown RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 SLC20A1Q8WUM9 679 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 SCLT1Q96NL6 688 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 ELAC2Q9BQ52 826 aaKnown RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 IKZF4Q9H2S9 585 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 UBE2TQ9NPD8 197 aaPredicted RBP14.23□□□□□ -0.13
VRK3-209ENST00000594948 SMCHD1A6NHR9 2005 aa14.23□□□□□ -0.13
VRK3-209ENST00000594948 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 RAD21O60216 631 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ATP2C2O75185 946 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 TCEA3O75764 348 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 VIMP08670 466 aaKnown RBP14.22□□□□□ -0.13
VRK3-209ENST00000594948 ALADP13716 330 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 MAN1A1P33908 653 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 SCNN1DP51172 638 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 VAMP7P51809 220 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 CALCOCO2Q13137 446 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ZNF268Q14587 947 aaPredicted RBP14.22□□□□□ -0.13
VRK3-209ENST00000594948 B3GNT9Q6UX72 402 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 EXOC3L1Q86VI1 746 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 MAIP1Q8WWC4 291 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 HOOK2Q96ED9 719 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
VRK3-209ENST00000594948 EMSYQ7Z589 1322 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 LRRN2O75325 713 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ECEL1O95672 775 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 PYGMP11217 842 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ITIH2P19823 946 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 MARCKSL1P49006 195 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 RWDD2BP57060 319 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 CAV1Q03135 178 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 LMNB2Q03252 620 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
VRK3-209ENST00000594948 MESDQ14696 234 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ABCB5Q2M3G0 1257 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 GALNTL6Q49A17 601 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 AADACL2Q6P093 401 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 RHBDF2Q6PJF5 856 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 MIGA2Q7L4E1 593 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 CEP57Q86XR8 500 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ARHGEF19Q8IW93 802 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 ZFPM1Q8IX07 1006 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 CCDC105Q8IYK2 499 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 FAM71AQ8IYT1 594 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 SYCP3Q8IZU3 236 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 EBF2Q9HAK2 575 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
VRK3-209ENST00000594948 GTF3C4Q9UKN8 822 aa14.22□□□□□ -0.13
VRK3-209ENST00000594948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
VRK3-209ENST00000594948 FSCN2O14926 492 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 GAS7O60861 476 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 SUN1O94901 812 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 RARAP10276 462 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 CHRNB2P17787 502 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 FGFR4P22455 802 aa14.21□□□□□ -0.13
VRK3-209ENST00000594948 HOXA13P31271 388 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms