RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 HES2Q9Y543 173 aa26.01■■□□□ 1.75
LSM4-204ENST00000594828 STK24Q9Y6E0 443 aa26.01■■□□□ 1.75
LSM4-204ENST00000594828 FAM86C2PA6NEL3 165 aa26■■□□□ 1.75
LSM4-204ENST00000594828 B4GALT5O43286 388 aa26■■□□□ 1.75
LSM4-204ENST00000594828 DCXO43602 365 aa26■■□□□ 1.75
LSM4-204ENST00000594828 CTSAP10619 480 aa26■■□□□ 1.75
LSM4-204ENST00000594828 GIT2Q14161 759 aa26■■□□□ 1.75
LSM4-204ENST00000594828 ECM1Q16610 540 aa26■■□□□ 1.75
LSM4-204ENST00000594828 ZBTB8OSQ8IWT0 167 aa26■■□□□ 1.75
LSM4-204ENST00000594828 HACE1Q8IYU2 909 aa26■■□□□ 1.75
LSM4-204ENST00000594828 TMEM87AQ8NBN3 555 aa26■■□□□ 1.75
LSM4-204ENST00000594828 CASP10Q92851 521 aa26■■□□□ 1.75
LSM4-204ENST00000594828 GAD1Q99259 594 aa26■■□□□ 1.75
LSM4-204ENST00000594828 APOL6Q9BWW8 343 aa26■■□□□ 1.75
LSM4-204ENST00000594828 PRMT7Q9NVM4 692 aaPredicted RBP26■■□□□ 1.75
LSM4-204ENST00000594828 A0A1B0GUA9 196 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.99■■□□□ 1.75
LSM4-204ENST00000594828 ARL5CA6NH57 179 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 CLASP2O75122 1294 aaKnown RBP25.99■■□□□ 1.75
LSM4-204ENST00000594828 CD2BP2O95400 341 aaKnown RBP25.99■■□□□ 1.75
LSM4-204ENST00000594828 HOXB8P17481 243 aaPredicted RBP25.99■■□□□ 1.75
LSM4-204ENST00000594828 SLC27A1Q6PCB7 646 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 CDR2LQ86X02 465 aaPredicted RBP25.99■■□□□ 1.75
LSM4-204ENST00000594828 IGSF22Q8N9C0 903 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 AUTS2Q8WXX7 1259 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 PRIMPOLQ96LW4 560 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 S1PR5Q9H228 398 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 STK39Q9UEW8 545 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 RAPGEFL1Q9UHV5 662 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 KIAA1024Q9UPX6 916 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 HCFC2Q9Y5Z7 792 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 IRAK3Q9Y616 596 aa25.99■■□□□ 1.75
LSM4-204ENST00000594828 LAD1O00515 517 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 NRP1O14786 923 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 INPPL1O15357 1258 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 MLH1P40692 756 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 MCM2P49736 904 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 CDCA2Q69YH5 1023 aaPredicted RBP25.98■■□□□ 1.75
LSM4-204ENST00000594828 SYCE2Q6PIF2 218 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 PPP4R3CPQ6ZMV5 832 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 SUSD6Q92537 303 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 PHF7Q9BWX1 381 aaPredicted RBP25.98■■□□□ 1.75
LSM4-204ENST00000594828 C2orf40Q9H1Z8 148 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 BHMT2Q9H2M3 363 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 GIT1Q9Y2X7 761 aa25.98■■□□□ 1.75
LSM4-204ENST00000594828 NPTXRO95502 500 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 GJB2P29033 226 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 RNF135Q8IUD6 432 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 SNX29Q8TEQ0 813 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 BSNDQ8WZ55 320 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 ZFP42Q96MM3 310 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 APOL5Q9BWW9 433 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 VN1R3Q9BXE9 311 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 FZD8Q9H461 694 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 NXF3Q9H4D5 531 aaKnown RBP25.97■■□□□ 1.75
LSM4-204ENST00000594828 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.97■■□□□ 1.75
LSM4-204ENST00000594828 DDX19AQ9NUU7 478 aaKnown RBP25.97■■□□□ 1.75
LSM4-204ENST00000594828 MIOSQ9NXC5 875 aa25.97■■□□□ 1.75
LSM4-204ENST00000594828 LOC730098B7Z3J9 87 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 H3BQV1 296 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 PRPHP41219 470 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 SCNN1GP51170 649 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 PPP2R5AQ15172 486 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 FAM187BQ17R55 369 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 TPRNQ4KMQ1 711 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 RILPL1Q5EBL4 403 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 DTHD1Q6ZMT9 781 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 COLGALT2Q8IYK4 626 aa25.96■■□□□ 1.75
LSM4-204ENST00000594828 AKAP5P24588 427 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 NAMPTP43490 491 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 OR1G1P47890 313 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 CBX2Q14781 532 aaPredicted RBP25.95■■□□□ 1.74
LSM4-204ENST00000594828 MAPK6Q16659 721 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 KRT79Q5XKE5 535 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 DEPTORQ8TB45 409 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 RPGRIP1Q96KN7 1286 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 TBC1D32Q96NH3 1257 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 POLD4Q9HCU8 107 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 PARP2Q9UGN5 583 aa25.95■■□□□ 1.74
LSM4-204ENST00000594828 PRG3Q9Y2Y8 225 aaPredicted RBP25.95■■□□□ 1.74
LSM4-204ENST00000594828 NR1I2O75469 434 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 DSC1Q08554 894 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 PRPF4BQ13523 1007 aaKnown RBP25.94■■□□□ 1.74
LSM4-204ENST00000594828 PTPN14Q15678 1187 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 IL17AQ16552 155 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 TMEM132AQ24JP5 1023 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 IFT74Q96LB3 600 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 MUTYHQ9UIF7 546 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 DNM3Q9UQ16 869 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 SMC3Q9UQE7 1217 aa25.94■■□□□ 1.74
LSM4-204ENST00000594828 PP2D1A8MPX8 630 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 PRR33A8MZF0 331 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 SSBP05455 408 aaKnown RBP eCLIP25.93■■□□□ 1.74
LSM4-204ENST00000594828 HERC4Q5GLZ8 1057 aaPredicted RBP25.93■■□□□ 1.74
LSM4-204ENST00000594828 CES5AQ6NT32 575 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 KIFAP3Q92845 792 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 KLK14Q9P0G3 267 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 C5orf42Q9H799 3197 aa25.93■■□□□ 1.74
LSM4-204ENST00000594828 TTLL13PA6NNM8 815 aa25.92■■□□□ 1.74
LSM4-204ENST00000594828 E9PMD0 336 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms