RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 PAX3P23760 479 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 SKIV2L2P42285 1042 aaKnown RBP13.11□□□□□ -0.31
LIG1-207ENST00000594759 KDSRQ06136 332 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
LIG1-207ENST00000594759 LRRC8BQ6P9F7 803 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
LIG1-207ENST00000594759 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 CCDC124Q96CT7 223 aaKnown RBP13.11□□□□□ -0.31
LIG1-207ENST00000594759 SERPINB12Q96P63 405 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 AIPL1Q9NZN9 384 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 ZNF232Q9UNY5 417 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 CIAO1O76071 339 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 IFNB1P01574 187 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 ZNF76P36508 570 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 MCAMP43121 646 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 MMP13P45452 471 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 CPA2P48052 419 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 MTTPP55157 894 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 FOXO4P98177 505 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 KRT81Q14533 505 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 LRRC42Q9Y546 428 aa13.11□□□□□ -0.31
LIG1-207ENST00000594759 GALK1P51570 392 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 TRPC3Q13507 836 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 NTRK3Q16288 839 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 B3GNT6Q6ZMB0 384 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 FAM81BQ96LP2 452 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 HAUS8Q9BT25 410 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 BAZ2BQ9UIF8 2168 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 FECHP22830 423 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 GSTO1P78417 241 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 DMPKQ09013 629 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 CYTH1Q15438 398 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 IFT122Q9HBG6 1241 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 ZNF212Q9UDV6 495 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 KRT36O76013 467 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 PLS3P13797 630 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 FLT3P36888 993 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 PSMC1P62191 440 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 CNGA3Q16281 694 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 PATL1Q86TB9 770 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 PALM2Q8IXS6 379 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 AK8Q96MA6 479 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 TRIM56Q9BRZ2 755 aaKnown RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 TUBA8Q9NY65 449 aaPredicted RBP13.1□□□□□ -0.31
LIG1-207ENST00000594759 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
LIG1-207ENST00000594759 ENO1P06733 434 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 NR2F2P24468 414 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 INAQ16352 499 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 TTI2Q6NXR4 508 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 WDR75Q8IWA0 830 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 METTL14Q9HCE5 456 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 PSMG1O95456 288 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 RARGP13631 454 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 MAN1A1P33908 653 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 RFX5P48382 616 aaPredicted RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 C16orf72Q14CZ0 275 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 CALCRLQ16602 461 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 TRIM50Q86XT4 487 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 TGFBRAP1Q8WUH2 860 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 SATB2Q9UPW6 733 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 CYP2D7A0A087X1C5 515 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 PJA2O43164 708 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 TTLL1O95922 423 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 PCMTD2Q9NV79 361 aa13.09□□□□□ -0.31
LIG1-207ENST00000594759 NKX1-2Q9UD57 310 aaPredicted RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 CNOT7Q9UIV1 285 aaKnown RBP13.09□□□□□ -0.31
LIG1-207ENST00000594759 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.31
LIG1-207ENST00000594759 H3BRJ5 948 aa13.08□□□□□ -0.31
LIG1-207ENST00000594759 KRT75O95678 551 aa13.08□□□□□ -0.31
LIG1-207ENST00000594759 AFPP02771 609 aaKnown RBP13.08□□□□□ -0.31
LIG1-207ENST00000594759 ABL2P42684 1182 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 1131.9 ms