RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 XXYLT1Q8NBI6 393 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 RDH13Q8NBN7 331 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 ANKRD7Q92527 254 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 XPNPEP3Q9NQH7 507 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 AKT3Q9Y243 479 aa14.42□□□□□ -0.1
VRK3-205ENST00000593919 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.42□□□□□ -0.1
VRK3-205ENST00000593919 ADAMTS4O75173 837 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 PIGRP01833 764 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 TUBB4AP04350 444 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 KLK7P49862 253 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 LIG4P49917 911 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
VRK3-205ENST00000593919 KCNH2Q12809 1159 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 TFDP1Q14186 410 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 ARHGEF6Q15052 776 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 TCERG1LQ5VWI1 586 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 ZBTB8OSQ8IWT0 167 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 POMGNT1Q8WZA1 660 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 SLC35C1Q96A29 364 aa14.41□□□□□ -0.1
VRK3-205ENST00000593919 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-205ENST00000593919 V9GYY5 206 aaPredicted RBP14.41□□□□□ -0.1
VRK3-205ENST00000593919 MSCO60682 206 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 HSPA6P17066 643 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 NKX3-2P78367 333 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 HIC1Q14526 733 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 CNGA4Q8IV77 575 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 SAAL1Q96ER3 474 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 PPP1R16BQ96T49 567 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 BEGAINQ9BUH8 593 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 TARS2Q9BW92 718 aaKnown RBP14.4□□□□□ -0.1
VRK3-205ENST00000593919 C2orf40Q9H1Z8 148 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 IFT122Q9HBG6 1241 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
VRK3-205ENST00000593919 GOLGA8IPA6NC78 632 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 GOLGA8JA6NMD2 632 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 KPNA6O60684 536 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
VRK3-205ENST00000593919 GARTP22102 1010 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 PTENP60484 403 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 ADAM17P78536 824 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 PPP2R3AQ06190 1150 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 BFSP1Q12934 665 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 MAPK6Q16659 721 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 CXCL17Q6UXB2 119 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 RAD9BQ6WBX8 426 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 KIAA0319LQ8IZA0 1049 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 NAA15Q9BXJ9 866 aaKnown RBP14.4□□□□□ -0.1
VRK3-205ENST00000593919 MINDY3Q9H8M7 445 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 SIK3Q9Y2K2 1263 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 TRIM17Q9Y577 477 aa14.4□□□□□ -0.1
VRK3-205ENST00000593919 A0A087WZ62 844 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 GOLGA6L9A6NEM1 432 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 INO80B-WBP1J3KQ70 363 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 AFPP02771 609 aaKnown RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 INHAP05111 366 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 PRKCBP05771 671 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 TRIM14Q14142 442 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 SNRNP35Q16560 246 aaKnown RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 FDXACB1Q9BRP7 624 aaPredicted RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 MTG1Q9BT17 334 aaPredicted RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 NFKBIZQ9BYH8 718 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 INO80BQ9C086 356 aaPredicted RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 HAPLN2Q9GZV7 340 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 ANKFY1Q9P2R3 1169 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 HDAC6Q9UBN7 1215 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 DDX20Q9UHI6 824 aaKnown RBP14.39□□□□□ -0.11
VRK3-205ENST00000593919 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
VRK3-205ENST00000593919 MAPK13O15264 365 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ZEB2O60315 1214 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ADRB2P07550 413 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 IQCF3P0C7M6 154 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 TRIM49P0CI25 452 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 TRIM49CP0CI26 452 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 HOXC8P31273 242 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 GRK4P32298 578 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 PHKA2P46019 1235 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 PRMT2P55345 433 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 MBTD1Q05BQ5 628 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 POU5F1BQ06416 359 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 INTS8Q75QN2 995 aaKnown RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 KLHDC9Q8NEP7 349 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 FBXL18Q96ME1 805 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 PCMTD1Q96MG8 357 aaPredicted RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 MRPL4Q9BYD3 311 aaKnown RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 TTYH3Q9C0H2 523 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 FAM49AQ9H0Q0 323 aaPredicted RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 L2HGDHQ9H9P8 463 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 PTCH2Q9Y6C5 1203 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 RNF225M0QZC1 329 aaPredicted RBP14.38□□□□□ -0.11
VRK3-205ENST00000593919 FANCGO15287 622 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 TREHO43280 583 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 ASGR1P07306 291 aa14.38□□□□□ -0.11
VRK3-205ENST00000593919 CCDC175P0C221 793 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms