RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PIGOQ8TEQ8 1089 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 KLHL5Q96PQ7 755 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 APOL6Q9BWW8 343 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 EMILIN2Q9BXX0 1053 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 RNF39Q9H2S5 420 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 UBN1Q9NPG3 1134 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 DBR1Q9UK59 544 aaKnown RBP22.77■■□□□ 1.24
TRIM47-207ENST00000593089 HES2Q9Y543 173 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 WDFY4Q6ZS81 3184 aa22.77■■□□□ 1.24
TRIM47-207ENST00000593089 KLRC2P26717 231 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 MLH1P40692 756 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 MBTD1Q05BQ5 628 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 NCBP1Q09161 790 aaKnown RBP22.76■■□□□ 1.23
TRIM47-207ENST00000593089 PCBP1Q15365 356 aaKnown RBP eCLIP22.76■■□□□ 1.23
TRIM47-207ENST00000593089 FEZF2Q8TBJ5 459 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 MTMR9Q96QG7 549 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 GAD1Q99259 594 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 CSRNP2Q9H175 543 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 STK39Q9UEW8 545 aa22.76■■□□□ 1.23
TRIM47-207ENST00000593089 PRG3Q9Y2Y8 225 aaPredicted RBP22.76■■□□□ 1.23
TRIM47-207ENST00000593089 TDRD15B5MCY1 1934 aaKnown RBP22.76■■□□□ 1.23
TRIM47-207ENST00000593089 ARL5CA6NH57 179 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 POTEMA6NI47 508 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 C2CD2LO14523 706 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 CNPP09543 421 aaKnown RBP22.75■■□□□ 1.23
TRIM47-207ENST00000593089 ATP2B1P20020 1258 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 GLRA2P23416 452 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 ARL2P36404 184 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 OR1G1P47890 313 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 RARRES1P49788 294 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 IFNLR1Q8IU57 520 aaPredicted RBP22.75■■□□□ 1.23
TRIM47-207ENST00000593089 TDRD5Q8NAT2 981 aaKnown RBP22.75■■□□□ 1.23
TRIM47-207ENST00000593089 CCDC51Q96ER9 411 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 MRPL17Q9NRX2 175 aaKnown RBP22.75■■□□□ 1.23
TRIM47-207ENST00000593089 MARCH5Q9NX47 278 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 SORCS3Q9UPU3 1222 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 MYO10Q9HD67 2058 aa22.75■■□□□ 1.23
TRIM47-207ENST00000593089 USO1O60763 962 aaKnown RBP22.74■■□□□ 1.23
TRIM47-207ENST00000593089 SCNN1GP51170 649 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 CLCN4P51793 760 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 VCPP55072 806 aaKnown RBP22.74■■□□□ 1.23
TRIM47-207ENST00000593089 GUCY1B3Q02153 619 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 POU5F1BQ06416 359 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 ST3GAL1Q11201 340 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 MTMR3Q13615 1198 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 AMHR2Q16671 573 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 COLGALT2Q8IYK4 626 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 ZFP42Q96MM3 310 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 TRIM6Q9C030 488 aaPredicted RBP22.74■■□□□ 1.23
TRIM47-207ENST00000593089 POLR3FQ9H1D9 316 aaPredicted RBP22.74■■□□□ 1.23
TRIM47-207ENST00000593089 TMEM60Q9H2L4 133 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 SFXN1Q9H9B4 322 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 MIOSQ9NXC5 875 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 DENND4AQ7Z401 1863 aa22.74■■□□□ 1.23
TRIM47-207ENST00000593089 B4GALT5O43286 388 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 LILRB3O75022 631 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 PDGFBP01127 241 aaPredicted RBP22.73■■□□□ 1.23
TRIM47-207ENST00000593089 SOD2P04179 222 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 URODP06132 367 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 ASGR2P07307 311 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 ARF4P18085 180 aaPredicted RBP22.73■■□□□ 1.23
TRIM47-207ENST00000593089 MCM7P33993 719 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 MAEAQ7L5Y9 396 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 TAS1R1Q7RTX1 841 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 CDR2LQ86X02 465 aaPredicted RBP22.73■■□□□ 1.23
TRIM47-207ENST00000593089 HERC2P3Q9BVR0 1158 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 SMOC2Q9H3U7 446 aa22.73■■□□□ 1.23
TRIM47-207ENST00000593089 NXF3Q9H4D5 531 aaKnown RBP22.73■■□□□ 1.23
TRIM47-207ENST00000593089 INPPL1O15357 1258 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 BRD1O95696 1058 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 PTPN5P54829 565 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 PHOX2BQ99453 314 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 PRRX2Q99811 253 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 NFKBIZQ9BYH8 718 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 GPRC5CQ9NQ84 441 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 LIMD1Q9UGP4 676 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 C2orf16Q68DN1 1984 aa22.72■■□□□ 1.23
TRIM47-207ENST00000593089 PIEZO1Q92508 2521 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 PLXNA3P51805 1871 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 F8W810 466 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 NPTXRO95502 500 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 SPATA31C1P0DKV0 1188 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 AKAP5P24588 427 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 AVPR2P30518 371 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 DSC1Q08554 894 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 SAFBQ15424 915 aaKnown RBP eCLIP22.71■■□□□ 1.23
TRIM47-207ENST00000593089 GPR149Q86SP6 731 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 UBALD2Q8IYN6 164 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 HACE1Q8IYU2 909 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 ZDHHC14Q8IZN3 488 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 GIT1Q9Y2X7 761 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 ZDBF2Q9HCK1 2354 aa22.71■■□□□ 1.23
TRIM47-207ENST00000593089 LRRIQ4A6NIV6 560 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 NR1I2O75469 434 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 SEC24BO95487 1268 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 XRCC6P12956 609 aaKnown RBP eCLIP22.7■■□□□ 1.22
TRIM47-207ENST00000593089 GLUD2P49448 558 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 TCF15Q12870 199 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 SLC27A1Q6PCB7 646 aa22.7■■□□□ 1.22
TRIM47-207ENST00000593089 CATSPER3Q86XQ3 398 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms