RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ABLIM1O14639 778 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 RB1P06400 928 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
TRIM47-206ENST00000592942 LIG1P18858 919 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 SLC27A1Q6PCB7 646 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 MYCT1Q8N699 235 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 FBXO22Q8NEZ5 403 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 GDPD5Q8WTR4 605 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 STAMQ92783 540 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 PGBD4Q96DM1 585 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 ACO2Q99798 780 aaKnown RBP16.86■□□□□ 0.29
TRIM47-206ENST00000592942 NXF3Q9H4D5 531 aaKnown RBP16.86■□□□□ 0.29
TRIM47-206ENST00000592942 PARVGQ9HBI0 331 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 MIOSQ9NXC5 875 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 LARSQ9P2J5 1176 aaKnown RBP16.86■□□□□ 0.29
TRIM47-206ENST00000592942 KCNG1Q9UIX4 513 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 VCANP13611 3396 aa16.86■□□□□ 0.29
TRIM47-206ENST00000592942 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 POLR2DO15514 142 aaKnown RBP16.85■□□□□ 0.29
TRIM47-206ENST00000592942 TRAK2O60296 914 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 NPTXRO95502 500 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 FOSL2P15408 326 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 CMA1P23946 247 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 GPM6BQ13491 265 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 CAMK1Q14012 370 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRIM47-206ENST00000592942 GSTCDQ8NEC7 633 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 DHX58Q96C10 678 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 GAS2L1Q99501 681 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-206ENST00000592942 TARS2Q9BW92 718 aaKnown RBP16.85■□□□□ 0.29
TRIM47-206ENST00000592942 PLVAPQ9BX97 442 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 SCAND2PQ9GZW5 306 aaPredicted RBP16.85■□□□□ 0.29
TRIM47-206ENST00000592942 GDPD2Q9HCC8 539 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 TNFSF13BQ9Y275 285 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 PHLPP2Q6ZVD8 1323 aa16.85■□□□□ 0.29
TRIM47-206ENST00000592942 NLRC5Q86WI3 1866 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 SPTBN5Q9NRC6 3674 aaKnown RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 N4BP3O15049 544 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 GRM6O15303 877 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 INPPL1O15357 1258 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 B4GALT3O60512 393 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 FAM13AO94988 1023 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 KRT18P05783 430 aaKnown RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 ITGA4P13612 1032 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 IGFBP4P22692 258 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 PROZP22891 400 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 AKAP5P24588 427 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 NMT1P30419 496 aaKnown RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 CTNNB1P35222 781 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 SMTNP53814 917 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 NOMO2Q5JPE7 1267 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 ATF7IP2Q5U623 682 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 KLHL23Q8NBE8 558 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 SPPL3Q8TCT6 385 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 P2RX5Q93086 422 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 ZBTB45Q96K62 511 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 IPO9Q96P70 1041 aaKnown RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 STRA6Q9BX79 667 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 CUEDC2Q9H467 287 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 NRDE2Q9H7Z3 1164 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 LMCD1Q9NZU5 365 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 KCNH3Q9ULD8 1083 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 RWDD3Q9Y3V2 267 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 TRANK1O15050 2925 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 REV3LO60673 3130 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 RALGAPA2Q2PPJ7 1873 aa16.84■□□□□ 0.29
TRIM47-206ENST00000592942 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
TRIM47-206ENST00000592942 A0A1B0GVL5 298 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 DDHD2O94830 711 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 ITGB1P05556 798 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 DNAJB1P25685 340 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 GTF2BQ00403 316 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 CNNM4Q6P4Q7 775 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 GLB1LQ6UWU2 654 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 ZNF280BQ86YH2 543 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 GAD1Q99259 594 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 MRPL4Q9BYD3 311 aaKnown RBP16.83■□□□□ 0.28
TRIM47-206ENST00000592942 HAPLN2Q9GZV7 340 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 TNMDQ9H2S6 317 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 ALG13Q9NP73 1137 aaKnown RBP16.83■□□□□ 0.28
TRIM47-206ENST00000592942 SNTG2Q9NY99 539 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 FAM13BQ9NYF5 915 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 GIT1Q9Y2X7 761 aa16.83■□□□□ 0.28
TRIM47-206ENST00000592942 ARL5CA6NH57 179 aa16.82■□□□□ 0.28
TRIM47-206ENST00000592942 PPP1R37O75864 691 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms