RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 PPP1R16BQ96T49 567 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
DDX39A-219ENST00000592927 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 TRPV2Q9Y5S1 764 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 CDY2AQ9Y6F7 541 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 SPTBN4Q9H254 2564 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 HIP1RO75146 1068 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 TRIOO75962 3097 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 RHOBTB3O94955 611 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 PARNO95453 639 aaKnown RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 CHRNA1P02708 482 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 SRGAP2CP0DJJ0 459 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 PPP1R2P41236 205 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 VCPP55072 806 aaKnown RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 MGAT3Q09327 533 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 LAMTOR4Q0VGL1 99 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 TFDP1Q14186 410 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 KIZQ2M2Z5 673 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 DPCR1Q3MIW9 517 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 TCEAL5Q5H9L2 206 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 ZNF658Q5TYW1 1059 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 UNC13DQ70J99 1090 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 KSR1Q8IVT5 923 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 NLRP4Q96MN2 994 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 POP1Q99575 1024 aaKnown RBP13.09□□□□□ -0.31
DDX39A-219ENST00000592927 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 POLD4Q9HCU8 107 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
DDX39A-219ENST00000592927 NPHP3-ACAD11A0A0J9YXS1 232 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 MYMKA6NI61 221 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 BECN2A8MW95 431 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 IKBKBO14920 756 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 KLRC4O43908 158 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GPR32O75388 356 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GJB5O95377 273 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GLRA2P23416 452 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GPC3P51654 580 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ASIC1P78348 528 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 PSMD2Q13200 908 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 IQCB1Q15051 598 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
DDX39A-219ENST00000592927 CLUL1Q15846 466 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 PTPROQ16827 1216 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ZNF410Q86VK4 478 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ZNF668Q96K58 619 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-219ENST00000592927 OSMRQ99650 979 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 REEP2Q9BRK0 252 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 GCOM2Q9BZD3 368 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ADAMTS10Q9H324 1103 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 ODF2LQ9ULJ1 636 aa13.08□□□□□ -0.32
DDX39A-219ENST00000592927 MYH11P35749 1972 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 TRIP12Q14669 1992 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-219ENST00000592927 A0A087WZ62 844 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 FAM13AO94988 1023 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 GHRP10912 638 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 BMP6P22004 513 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-219ENST00000592927 CASP1P29466 404 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 AVPR2P30518 371 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 TPM4P67936 248 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 CACNB1Q02641 598 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-219ENST00000592927 STIM1Q13586 685 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 GIT2Q14161 759 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 COL19A1Q14993 1142 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 PPP2R5AQ15172 486 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 KMT5BQ4FZB7 885 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 TIGD5Q53EQ6 642 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 COBLL1Q53SF7 1204 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 DYMQ7RTS9 669 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 DAW1Q8N136 415 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 RNF149Q8NC42 400 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 DDX12PQ92771 950 aa13.07□□□□□ -0.32
DDX39A-219ENST00000592927 FDXACB1Q9BRP7 624 aaPredicted RBP13.07□□□□□ -0.32
DDX39A-219ENST00000592927 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms