RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 SFNP31947 248 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ASPHQ12797 758 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 PGBD4Q96DM1 585 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 CALN1Q9BXU9 219 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ATP6V0A4Q9HBG4 840 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ADAM22Q9P0K1 906 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 COX16Q9P0S2 106 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 CXCL9Q07325 125 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 DBN1Q16643 649 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 BBS9Q3SYG4 887 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 N4BP2L2Q92802 583 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 CHMP6Q96FZ7 201 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 MSTO1Q9BUK6 570 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 DNAJC17Q9NVM6 304 aaKnown RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 MAP3K20Q9NYL2 800 aaKnown RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 PRPSAP1Q14558 356 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 KAZALD1Q96I82 304 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 SKIP12755 728 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 PCGF5Q86SE9 256 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 ERICH1Q86X53 443 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 TMEM39BQ9GZU3 492 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 RASA4BC9J798 803 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 RASA4O43374 803 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 NTSR2O95665 410 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 CPT1AP50416 773 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 DRP2Q13474 957 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 ATG16L1Q676U5 607 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 PRPF31Q8WWY3 499 aaKnown RBP13.56□□□□□ -0.24
DNMT1-228ENST00000592705 VPS33BQ9H267 617 aa13.56□□□□□ -0.24
DNMT1-228ENST00000592705 AP5Z1O43299 807 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PRPSAP2O60256 369 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 LMNAP02545 664 aaKnown RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 KRT17Q04695 432 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 STK4Q13043 487 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 GLYCTKQ8IVS8 523 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 TRIM10Q9UDY6 481 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 ATP11BQ9Y2G3 1177 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PPP1R37O75864 691 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 EYA4O95677 639 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 MYBL1P10243 752 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 CD58P19256 250 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PEX19P40855 299 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 ARL4CP56559 192 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 TTC13Q8NBP0 860 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PARD3BQ8TEW8 1205 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 EPN3Q9H201 632 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 SMIM24O75264 130 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 SUPT20HL2P0C7V6 817 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 ESRRAP11474 423 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 RAG1P15918 1043 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 LDHDQ86WU2 507 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 EIF2AK1Q9BQI3 630 aaKnown RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 TRIM4Q9C037 500 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 ANGPTL2Q9UKU9 493 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 EIF3HO15372 352 aaKnown RBP eCLIP13.55□□□□□ -0.248e-7■■■■■ 29.8
DNMT1-228ENST00000592705 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 STAG3L1P0CL83 205 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 H2AFXP16104 143 aaPredicted RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 MDH1P40925 334 aaKnown RBP13.55□□□□□ -0.24
DNMT1-228ENST00000592705 BFSP2Q13515 415 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 MMGT1Q8N4V1 131 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PPP1R9AQ9ULJ8 1098 aa13.55□□□□□ -0.24
DNMT1-228ENST00000592705 PPLO60437 1756 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 STXBP3O00186 592 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CPB1P15086 417 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CCDC137Q6PK04 289 aaKnown RBP13.54□□□□□ -0.24
DNMT1-228ENST00000592705 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 TMEM60Q9H2L4 133 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 MAP3K7O43318 606 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CTSHP09668 335 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 ARL4AP40617 200 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 GRIN1Q05586 938 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 KRT39Q6A163 491 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 HPS3Q969F9 1004 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 RNF208Q9H0X6 261 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 SPATS2LQ9NUQ6 558 aaKnown RBP13.54□□□□□ -0.24
DNMT1-228ENST00000592705 SCOCQ9UIL1 159 aa13.54□□□□□ -0.24
DNMT1-228ENST00000592705 DEPDC5O75140 1603 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms