RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CYP1A2P05177 515 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 PLS3P13797 630 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 ZNF568Q3ZCX4 644 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 DENND2CQ68D51 928 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 COL23A1Q86Y22 540 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 FBXO25Q8TCJ0 367 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 ACER1Q8TDN7 264 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 KRT35Q92764 455 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 C18orf8Q96DM3 657 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 ZNF317Q96PQ6 595 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 TMOD4Q9NZQ9 345 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 CTTNBP2NLQ9P2B4 639 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 SHBGP04278 402 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 P4HBP07237 508 aaKnown RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 TTC27Q6P3X3 843 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC121Q6ZUS5 278 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 CYFIP1Q7L576 1253 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 XXYLT1Q8NBI6 393 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ATXN2LQ8WWM7 1075 aaKnown RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 PRMT6Q96LA8 375 aaPredicted RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ZBTB21Q9ULJ3 1066 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 AGTP01019 485 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 GHRP10912 638 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ITGB5P18084 799 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 RPL21P46778 160 aaKnown RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ADCY2Q08462 1091 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 SIX1Q15475 284 aaPredicted RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ANKRD20A8PQ5CZ79 823 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 GKAP1Q5VSY0 366 aaPredicted RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 SHC3Q92529 594 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 ART4Q93070 314 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 CHMP6Q96FZ7 201 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 SEPT11Q9NVA2 429 aaKnown RBP12.5□□□□□ -0.41
ZNF540-210ENST00000592533 HSPBP1Q9NZL4 362 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
ZNF540-210ENST00000592533 COMTP21964 271 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 COPB2P35606 906 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 MARCKSL1P49006 195 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 SLMAPQ14BN4 828 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 C6orf118Q5T5N4 469 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 SEL1L2Q5TEA6 688 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 KDM4CQ9H3R0 1056 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 MTRF1LQ9UGC7 380 aaKnown RBP12.49□□□□□ -0.41
ZNF540-210ENST00000592533 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 EP400Q96L91 3159 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 ASAP2O43150 1006 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 RARRES1P49788 294 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 PLTPP55058 493 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 ENPEPQ07075 957 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
ZNF540-210ENST00000592533 NOP9Q86U38 636 aaKnown RBP12.49□□□□□ -0.41
ZNF540-210ENST00000592533 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 TMEM117Q9H0C3 514 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 UVRAGQ9P2Y5 699 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 GTF3C4Q9UKN8 822 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 PARP14Q460N5 1801 aa12.49□□□□□ -0.41
ZNF540-210ENST00000592533 H0YHG0 523 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 TBC1D12O60347 775 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 MMP10P09238 476 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 RARGP13631 454 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 UBXN2AP68543 259 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC137Q6PK04 289 aaKnown RBP12.48□□□□□ -0.41
ZNF540-210ENST00000592533 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 SLC13A5Q86YT5 568 aaPredicted RBP12.48□□□□□ -0.41
ZNF540-210ENST00000592533 CCT6BQ92526 530 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 ZHX2Q9Y6X8 837 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 CNTNAP1P78357 1384 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 COILP38432 576 aaPredicted RBP12.48□□□□□ -0.41
ZNF540-210ENST00000592533 PTGER2P43116 358 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 GCLMP48507 274 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 MXI1P50539 228 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 FMO1Q01740 532 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 AADACL2Q6P093 401 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 ADAT2Q7Z6V5 191 aaKnown RBP12.48□□□□□ -0.41
ZNF540-210ENST00000592533 FLAD1Q8NFF5 587 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 C7orf43Q8WVR3 580 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 HVCN1Q96D96 273 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 KREMEN1Q96MU8 473 aa12.48□□□□□ -0.41
ZNF540-210ENST00000592533 STMN4Q9H169 189 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms