RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 ECM1Q16610 540 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 CDCA2Q69YH5 1023 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 DTHD1Q6ZMT9 781 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 TMEM173Q86WV6 379 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 ZBTB8OSQ8IWT0 167 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 FAM193BQ96PV7 902 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 EIF2AQ9BY44 585 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 GBP3Q9H0R5 595 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 C2orf40Q9H1Z8 148 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 PRMT7Q9NVM4 692 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 KIAA1024Q9UPX6 916 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 FAN1Q9Y2M0 1017 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 NCOR1O75376 2440 aa10.74□□□□□ -0.69
PRKCSH-215ENST00000592435 H3BQV1 296 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 NRP1O14786 923 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 B4GALT5O43286 388 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 GPR37L1O60883 481 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 POMCP01189 267 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 RBM10P98175 930 aaKnown RBP10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 IL17AQ16552 155 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 MAPK6Q16659 721 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 KRT79Q5XKE5 535 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 ANKRD54Q6NXT1 300 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 KCTD17Q8N5Z5 321 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 SNX29Q8TEQ0 813 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 SUSD6Q92537 303 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 KIFAP3Q92845 792 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 ZBP1Q9H171 429 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 BHMT2Q9H2M3 363 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 RNF39Q9H2S5 420 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 DNM3Q9UQ16 869 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 SMC3Q9UQE7 1217 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 USP15Q9Y4E8 981 aaPredicted RBP10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 HES2Q9Y543 173 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 HCFC2Q9Y5Z7 792 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 ATG2AQ2TAZ0 1938 aa10.73□□□□□ -0.69
PRKCSH-215ENST00000592435 ACKR2O00590 384 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 B4GALT3O60512 393 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 CLASP2O75122 1294 aaKnown RBP10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 NR1I2O75469 434 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 COL9A1P20849 921 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 MLH1P40692 756 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 EFNA5P52803 228 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ATP2C1P98194 919 aaPredicted RBP10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 DSC1Q08554 894 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 TMEM31Q5JXX7 168 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ARL6IP4Q66PJ3 421 aaKnown RBP10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 SYCE2Q6PIF2 218 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 COLGALT2Q8IYK4 626 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 TMEM87AQ8NBN3 555 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 DEPTORQ8TB45 409 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 BSNDQ8WZ55 320 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 CASP10Q92851 521 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ZFP42Q96MM3 310 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 GAD1Q99259 594 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 PHF7Q9BWX1 381 aaPredicted RBP10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 MIOSQ9NXC5 875 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ARID2Q68CP9 1835 aa10.72□□□□□ -0.69
PRKCSH-215ENST00000592435 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 LOC730098B7Z3J9 87 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 N4BP3O15049 544 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 DCXO43602 365 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 LILRB3O75022 631 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 NPTXRO95502 500 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 AKAP5P24588 427 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 CDC25AP30304 524 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 OR1G1P47890 313 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 ITIH3Q06033 890 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 PRPF4BQ13523 1007 aaKnown RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 HYIQ5T013 277 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 LARP1BQ659C4 914 aaKnown RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 LLGL2Q6P1M3 1020 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 CDR2LQ86X02 465 aaPredicted RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 GSTCDQ8NEC7 633 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 LRFN3Q9BTN0 628 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 MMTAG2Q9BU76 263 aaKnown RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 COLEC11Q9BWP8 271 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 VN1R3Q9BXE9 311 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 ADAM7Q9H2U9 754 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 NXF3Q9H4D5 531 aaKnown RBP10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 C17orf75Q9HAS0 396 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 C11orf16Q9NQ32 467 aa10.71□□□□□ -0.69
PRKCSH-215ENST00000592435 SSX2IPQ9Y2D8 614 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms