RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.57
SDF2-209ENST00000591903 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.58
SDF2-209ENST00000591903 DDX39AO00148 427 aaKnown RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 LILRB3O75022 631 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 LILRB5O75023 590 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 GLUD1P00367 558 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 URODP06132 367 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 LAMP2P13473 410 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 ATP4AP20648 1035 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 RAB27AP51159 221 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 GPC3P51654 580 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 NAPAP54920 295 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 CSTF1Q05048 431 aaKnown RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 DMWDQ09019 674 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 AP3B2Q13367 1082 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 HTR4Q13639 388 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 HEATR3Q7Z4Q2 680 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 LINC01465Q8N7H1 131 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 FAM184AQ8NB25 1140 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 URGCPQ8TCY9 931 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 NETO1Q8TDF5 533 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 BCL7CQ8WUZ0 217 aaPredicted RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 SMG7Q92540 1137 aaKnown RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 TMEM175Q9BSA9 504 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 DDX23Q9BUQ8 820 aaKnown RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 VN1R3Q9BXE9 311 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
SDF2-209ENST00000591903 PLEKHA4Q9H4M7 779 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 C6orf50Q9HD87 102 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 RIC8AQ9NPQ8 531 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 TCEAL9Q9UHQ7 104 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 SMC3Q9UQE7 1217 aa11.45□□□□□ -0.58
SDF2-209ENST00000591903 SSBP05455 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
SDF2-209ENST00000591903 PSAPP07602 524 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 SFPQP23246 707 aaKnown RBP eCLIP11.44□□□□□ -0.58
SDF2-209ENST00000591903 ZNF76P36508 570 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 SLC11A1P49279 550 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 TRIM29Q14134 588 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 PPM1JQ5JR12 505 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 ZNF746Q6NUN9 644 aaPredicted RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 DDX1Q92499 740 aaKnown RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 NELL1Q92832 810 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 RPS6KC1Q96S38 1066 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 PHF20Q9BVI0 1012 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 GCOM2Q9BZD3 368 aaPredicted RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 PIDD1Q9HB75 910 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 ZDHHC7Q9NXF8 308 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 KANSL3Q9P2N6 904 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 DNAJB4Q9UDY4 337 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 NUMBLQ9Y6R0 609 aa11.44□□□□□ -0.58
SDF2-209ENST00000591903 TDRD15B5MCY1 1934 aaKnown RBP11.44□□□□□ -0.58
SDF2-209ENST00000591903 ATRXP46100 2492 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 IPO5O00410 1097 aaKnown RBP11.43□□□□□ -0.58
SDF2-209ENST00000591903 SLC30A4O14863 429 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 NCAM2O15394 837 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 JAK2O60674 1132 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 LRP3O75074 770 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 ZNF623O75123 536 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 OFD1O75665 1012 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 SOD2P04179 222 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 ALDH2P05091 517 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 TGM1P22735 817 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 GJB2P29033 226 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 SREBF1P36956 1147 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 ADCY7P51828 1080 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 PFKPQ01813 784 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 MTSS1LQ765P7 747 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 GET4Q7L5D6 327 aaPredicted RBP11.43□□□□□ -0.58
SDF2-209ENST00000591903 LRRC71Q8N4P6 559 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 FBXO18Q8NFZ0 1043 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 FAM193BQ96PV7 902 aaPredicted RBP11.43□□□□□ -0.58
SDF2-209ENST00000591903 NELL2Q99435 816 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 HERC2P3Q9BVR0 1158 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 ANO3Q9BYT9 981 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 GBP3Q9H0R5 595 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 TBC1D22BQ9NU19 505 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 FAM105AQ9NUU6 356 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 RAB23Q9ULC3 237 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 INPP5FQ9Y2H2 1132 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 FAN1Q9Y2M0 1017 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
SDF2-209ENST00000591903 SMCO2A6NFE2 343 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 M0R2N6 131 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 TEX28O15482 410 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 FOXD2O60548 495 aaPredicted RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 LRRN2O75325 713 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 HSP90AA1P07900 732 aaKnown RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 FGFR4P22455 802 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 RPS9P46781 194 aaKnown RBP11.42□□□□□ -0.58
SDF2-209ENST00000591903 NRLP54845 237 aa11.42□□□□□ -0.58
SDF2-209ENST00000591903 NLRP5P59047 1200 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms