RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 TJP2Q9UDY2 1190 aa8.82□□□□□ -1
VMP1-213ENST00000591877 LCTP09848 1927 aa8.82□□□□□ -1
VMP1-213ENST00000591877 ATP2A1O14983 1001 aa8.81□□□□□ -1
VMP1-213ENST00000591877 ORC4O43929 436 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SLC3A2P08195 630 aaKnown RBP8.81□□□□□ -1
VMP1-213ENST00000591877 FOSL1P15407 271 aa8.81□□□□□ -1
VMP1-213ENST00000591877 ITGB5P18084 799 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SDSP20132 328 aa8.81□□□□□ -1
VMP1-213ENST00000591877 NTF4P34130 210 aa8.81□□□□□ -1
VMP1-213ENST00000591877 LRRC26Q2I0M4 334 aa8.81□□□□□ -1
VMP1-213ENST00000591877 TKFCQ3LXA3 575 aa8.81□□□□□ -1
VMP1-213ENST00000591877 GNPTABQ3T906 1256 aa8.81□□□□□ -1
VMP1-213ENST00000591877 PPM1JQ5JR12 505 aa8.81□□□□□ -1
VMP1-213ENST00000591877 ANO1Q5XXA6 986 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SLFN13Q68D06 897 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SNRNP48Q6IEG0 339 aaKnown RBP8.81□□□□□ -1
VMP1-213ENST00000591877 TICAM2Q86XR7 235 aa8.81□□□□□ -1
VMP1-213ENST00000591877 C7orf61Q8IZ16 206 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SHISA5Q8N114 240 aa8.81□□□□□ -1
VMP1-213ENST00000591877 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
VMP1-213ENST00000591877 RILPL2Q969X0 211 aa8.81□□□□□ -1
VMP1-213ENST00000591877 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
VMP1-213ENST00000591877 FBXL18Q96ME1 805 aa8.81□□□□□ -1
VMP1-213ENST00000591877 MMP19Q99542 508 aa8.81□□□□□ -1
VMP1-213ENST00000591877 TEX13BQ9BXU2 312 aa8.81□□□□□ -1
VMP1-213ENST00000591877 OSBPL1AQ9BXW6 950 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SUGCTQ9HAC7 445 aa8.81□□□□□ -1
VMP1-213ENST00000591877 SLC38A10Q9HBR0 1119 aa8.81□□□□□ -1
VMP1-213ENST00000591877 RAVER2Q9HCJ3 691 aaKnown RBP8.81□□□□□ -1
VMP1-213ENST00000591877 FEM1BQ9UK73 627 aa8.81□□□□□ -1
VMP1-213ENST00000591877 ZNF536O15090 1300 aa8.8□□□□□ -1
VMP1-213ENST00000591877 ZMYM6O95789 1325 aa8.8□□□□□ -1
VMP1-213ENST00000591877 CCDC171Q6TFL3 1326 aa8.8□□□□□ -1
VMP1-213ENST00000591877 DNAJC25-GNG10A0A024R161 153 aa8.8□□□□□ -1
VMP1-213ENST00000591877 TSPY2A6NKD2 308 aa8.8□□□□□ -1
VMP1-213ENST00000591877 TMEM232C9JQI7 657 aa8.8□□□□□ -1
VMP1-213ENST00000591877 SEPT4O43236 478 aa8.8□□□□□ -1
VMP1-213ENST00000591877 MSCO60682 206 aa8.8□□□□□ -1
VMP1-213ENST00000591877 ZBED4O75132 1171 aa8.8□□□□□ -1
VMP1-213ENST00000591877 MCCP23508 829 aa8.8□□□□□ -1
VMP1-213ENST00000591877 MAP4P27816 1152 aaKnown RBP8.8□□□□□ -1
VMP1-213ENST00000591877 MASP1P48740 699 aa8.8□□□□□ -1
VMP1-213ENST00000591877 IRX6P78412 446 aaPredicted RBP8.8□□□□□ -1
VMP1-213ENST00000591877 KCTD2Q14681 263 aa8.8□□□□□ -1
VMP1-213ENST00000591877 SGO2Q562F6 1265 aa8.8□□□□□ -1
VMP1-213ENST00000591877 FDX2Q6P4F2 183 aa8.8□□□□□ -1
VMP1-213ENST00000591877 CPXCR1Q8N123 301 aa8.8□□□□□ -1
VMP1-213ENST00000591877 SMG8Q8ND04 991 aaKnown RBP8.8□□□□□ -1
VMP1-213ENST00000591877 CCDC74BQ96LY2 380 aa8.8□□□□□ -1
VMP1-213ENST00000591877 FGD4Q96M96 766 aa8.8□□□□□ -1
VMP1-213ENST00000591877 GDF15Q99988 308 aa8.8□□□□□ -1
VMP1-213ENST00000591877 SLC5A4Q9NY91 659 aa8.8□□□□□ -1
VMP1-213ENST00000591877 SUCOQ9UBS9 1254 aaKnown RBP8.8□□□□□ -1
VMP1-213ENST00000591877 ZMYND8Q9ULU4 1186 aaPredicted RBP8.8□□□□□ -1
VMP1-213ENST00000591877 STX8Q9UNK0 236 aa8.8□□□□□ -1
VMP1-213ENST00000591877 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
VMP1-213ENST00000591877 LTBP2Q14767 1821 aa8.8□□□□□ -1
VMP1-213ENST00000591877 GAS2O43903 313 aaKnown RBP8.79□□□□□ -1
VMP1-213ENST00000591877 RANBP6O60518 1105 aaKnown RBP8.79□□□□□ -1
VMP1-213ENST00000591877 ASMTLO95671 621 aa8.79□□□□□ -1
VMP1-213ENST00000591877 ZNF865P0CJ78 1059 aaPredicted RBP8.79□□□□□ -1
VMP1-213ENST00000591877 JUNBP17275 347 aaPredicted RBP8.79□□□□□ -1
VMP1-213ENST00000591877 SYN1P17600 705 aa8.79□□□□□ -1
VMP1-213ENST00000591877 COPB2P35606 906 aa8.79□□□□□ -1
VMP1-213ENST00000591877 HAND2P61296 217 aa8.79□□□□□ -1
VMP1-213ENST00000591877 GJC2Q5T442 439 aaPredicted RBP8.79□□□□□ -1
VMP1-213ENST00000591877 ZNF648Q5T619 568 aaPredicted RBP8.79□□□□□ -1
VMP1-213ENST00000591877 RCSD1Q6JBY9 416 aa8.79□□□□□ -1
VMP1-213ENST00000591877 KCTD1Q719H9 257 aa8.79□□□□□ -1
VMP1-213ENST00000591877 VSIG10LQ86VR7 867 aa8.79□□□□□ -1
VMP1-213ENST00000591877 TBC1D10CQ8IV04 446 aa8.79□□□□□ -1
VMP1-213ENST00000591877 STAG1Q8WVM7 1258 aa8.79□□□□□ -1
VMP1-213ENST00000591877 RUSC1Q9BVN2 902 aa8.79□□□□□ -1
VMP1-213ENST00000591877 SENP6Q9GZR1 1112 aaPredicted RBP8.79□□□□□ -1
VMP1-213ENST00000591877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.79□□□□□ -1
VMP1-213ENST00000591877 IL25Q9H293 177 aa8.79□□□□□ -1
VMP1-213ENST00000591877 CYP4F12Q9HCS2 524 aa8.79□□□□□ -1
VMP1-213ENST00000591877 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
VMP1-213ENST00000591877 LRRC37A2A6NM11 1700 aa8.79□□□□□ -1
VMP1-213ENST00000591877 SZT2Q5T011 3432 aa8.78□□□□□ -1
VMP1-213ENST00000591877 ANKRD34BA5PLL1 514 aa8.78□□□□□ -1
VMP1-213ENST00000591877 DNM1LO00429 736 aa8.78□□□□□ -1
VMP1-213ENST00000591877 PLA2G6O60733 806 aa8.78□□□□□ -1
VMP1-213ENST00000591877 RFPL3O75679 317 aa8.78□□□□□ -1
VMP1-213ENST00000591877 SNAI1O95863 264 aaPredicted RBP8.78□□□□□ -1
VMP1-213ENST00000591877 PRNPP04156 253 aa8.78□□□□□ -1
VMP1-213ENST00000591877 FAM153BP0C7A2 387 aa8.78□□□□□ -1
VMP1-213ENST00000591877 GSPT1P15170 499 aaKnown RBP8.78□□□□□ -1
VMP1-213ENST00000591877 SLC1A4P43007 532 aa8.78□□□□□ -1
VMP1-213ENST00000591877 STAT2P52630 851 aa8.78□□□□□ -1
VMP1-213ENST00000591877 OAZ1P54368 228 aa8.78□□□□□ -1
VMP1-213ENST00000591877 SNAP25P60880 206 aa8.78□□□□□ -1
VMP1-213ENST00000591877 LRRC41Q15345 812 aa8.78□□□□□ -1
VMP1-213ENST00000591877 ZNF124Q15973 351 aa8.78□□□□□ -1
VMP1-213ENST00000591877 RRP12Q5JTH9 1297 aaKnown RBP8.78□□□□□ -1
VMP1-213ENST00000591877 CWC27Q6UX04 472 aaKnown RBP8.78□□□□□ -1
VMP1-213ENST00000591877 MAMDC4Q6UXC1 1216 aa8.78□□□□□ -1
VMP1-213ENST00000591877 FAM160B2Q86V87 743 aa8.78□□□□□ -1
VMP1-213ENST00000591877 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
VMP1-213ENST00000591877 CYB5D2Q8WUJ1 264 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms