RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 TMEM161BQ8NDZ6 487 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
VMP1-211ENST00000591315 ZFP42Q96MM3 310 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 GAD1Q99259 594 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 TARS2Q9BW92 718 aaKnown RBP12.7□□□□□ -0.38
VMP1-211ENST00000591315 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 KLK14Q9P0G3 267 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
VMP1-211ENST00000591315 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 C5orf67F2Z3F1 127 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 K7ERI5 159 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 POMCP01189 267 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 KRT18P05783 430 aaKnown RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 ITGA4P13612 1032 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 POU3F3P20264 500 aaPredicted RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 NMT1P30419 496 aaKnown RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 AXLP30530 894 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 STAT6P42226 847 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 RAB27AP51159 221 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 E2F4Q16254 413 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 NOMO2Q5JPE7 1267 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 KCTD17Q8N5Z5 321 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 MYCT1Q8N699 235 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 SPPL3Q8TCT6 385 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 DHX58Q96C10 678 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 DNAJC19Q96DA6 116 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 CCDC51Q96ER9 411 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 ZBTB45Q96K62 511 aaPredicted RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 SAMD11Q96NU1 681 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 FIZ1Q96SL8 496 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 TIPINQ9BVW5 301 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 IKZF4Q9H2S9 585 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 DNAJB4Q9UDY4 337 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 STK17AQ9UEE5 414 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 SPTBN5Q9NRC6 3674 aaKnown RBP12.69□□□□□ -0.38
VMP1-211ENST00000591315 XIRP2A4UGR9 3374 aa12.69□□□□□ -0.38
VMP1-211ENST00000591315 HOXA2O43364 376 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 DDHD2O94830 711 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 FAM13AO94988 1023 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 MAPTP10636 758 aaKnown RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 CASP1P29466 404 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 IRS1P35568 1242 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 TXLNAP40222 546 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 MLH1P40692 756 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 ZNF131P52739 623 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 EFNA5P52803 228 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 NCBP1Q09161 790 aaKnown RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 PCBP1Q15365 356 aaKnown RBP eCLIP12.68□□□□□ -0.38
VMP1-211ENST00000591315 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 SLC27A1Q6PCB7 646 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 CCDC73Q6ZRK6 1079 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 SV2BQ7L1I2 683 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 LRRC43Q8N309 656 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 CEP120Q8N960 986 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 DDX12PQ92771 950 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 PGBD4Q96DM1 585 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 PRIMPOLQ96LW4 560 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 ACO2Q99798 780 aaKnown RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 NTPCRQ9BSD7 190 aaKnown RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 TRIM6Q9C030 488 aaPredicted RBP12.68□□□□□ -0.38
VMP1-211ENST00000591315 TMEM134Q9H6X4 195 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 RSAD1Q9HA92 442 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 KCND2Q9NZV8 630 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 CACNG4Q9UBN1 327 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
VMP1-211ENST00000591315 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 ARL5CA6NH57 179 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 F8W810 466 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 ABLIM1O14639 778 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 N4BP3O15049 544 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 POLR2DO15514 142 aaKnown RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 FGF18O76093 207 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 RB1P06400 928 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 SKIP12755 728 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 SCNN1GP51170 649 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 NCKAP1LP55160 1127 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 SEZ6Q53EL9 994 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 ZC2HC1CQ53FD0 456 aaPredicted RBP12.67□□□□□ -0.38
VMP1-211ENST00000591315 ATL3Q6DD88 541 aa12.67□□□□□ -0.38
VMP1-211ENST00000591315 KCNT2Q6UVM3 1135 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms