RNA–Protein interactions for RNA: ENST00000591309.5

ERCC2-212, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC2, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-212ENST00000591309 RCOR1Q9UKL0 485 aa22.75■■□□□ 1.23
ERCC2-212ENST00000591309 PCDHA7Q9UN72 937 aa22.75■■□□□ 1.23
ERCC2-212ENST00000591309 ZDHHC9Q9Y397 364 aa22.75■■□□□ 1.23
ERCC2-212ENST00000591309 MTCH2Q9Y6C9 303 aa22.75■■□□□ 1.23
ERCC2-212ENST00000591309 POU3F3P20264 500 aaPredicted RBP22.74■■□□□ 1.23
ERCC2-212ENST00000591309 THNSL1Q8IYQ7 743 aa22.74■■□□□ 1.23
ERCC2-212ENST00000591309 FAM193BQ96PV7 902 aaPredicted RBP22.74■■□□□ 1.23
ERCC2-212ENST00000591309 MRPL4Q9BYD3 311 aaKnown RBP22.74■■□□□ 1.23
ERCC2-212ENST00000591309 ARHGAP28Q9P2N2 729 aa22.74■■□□□ 1.23
ERCC2-212ENST00000591309 PARP2Q9UGN5 583 aa22.74■■□□□ 1.23
ERCC2-212ENST00000591309 CARNS1A5YM72 827 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 LPXNO60711 386 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 ANP32AP39687 249 aaKnown RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 GIT2Q14161 759 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 SKIV2LQ15477 1246 aaKnown RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 ATF7IP2Q5U623 682 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 AGMOQ6ZNB7 445 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 DYMQ7RTS9 669 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 IQUBQ8NA54 791 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 COLGALT1Q8NBJ5 622 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 SMG8Q8ND04 991 aaKnown RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 LRRC15Q8TF66 581 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 ZNF558Q96NG5 402 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 NTPCRQ9BSD7 190 aaKnown RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 TCHPQ9BT92 498 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 SCAND2PQ9GZW5 306 aaPredicted RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 LMAN2LQ9H0V9 348 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 PDZD7Q9H5P4 517 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 RALGAPA2Q2PPJ7 1873 aa22.73■■□□□ 1.23
ERCC2-212ENST00000591309 FNDC1Q4ZHG4 1894 aaPredicted RBP22.73■■□□□ 1.23
ERCC2-212ENST00000591309 TRAK2O60296 914 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 OFD1O75665 1012 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 LINC00271P0C7V0 271 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 SCP2P22307 547 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 ABCD1P33897 745 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 ALDH7A1P49419 539 aaKnown RBP22.72■■□□□ 1.23
ERCC2-212ENST00000591309 AMPD3Q01432 767 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 DCAF4L1Q3SXM0 396 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 KLHL23Q8NBE8 558 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 DHX58Q96C10 678 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 MRPL38Q96DV4 380 aaKnown RBP22.72■■□□□ 1.23
ERCC2-212ENST00000591309 PYM1Q9BRP8 204 aaKnown RBP22.72■■□□□ 1.23
ERCC2-212ENST00000591309 CUEDC2Q9H467 287 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 CWH43Q9H720 699 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 GIT1Q9Y2X7 761 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 HES2Q9Y543 173 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 NLRC5Q86WI3 1866 aa22.72■■□□□ 1.23
ERCC2-212ENST00000591309 MYH11P35749 1972 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 MEIS3P2A8K0S8 358 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 K7ENM7 598 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 PPM1AP35813 382 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 AXDND1Q5T1B0 1012 aaPredicted RBP22.71■■□□□ 1.23
ERCC2-212ENST00000591309 SHC4Q6S5L8 630 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 KCNT2Q6UVM3 1135 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 FAM178BQ8IXR5 827 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 SLC17A8Q8NDX2 589 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 DDX12PQ92771 950 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 BICD1Q96G01 975 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 GBP3Q9H0R5 595 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 NXF3Q9H4D5 531 aaKnown RBP22.71■■□□□ 1.23
ERCC2-212ENST00000591309 ALG13Q9NP73 1137 aaKnown RBP22.71■■□□□ 1.23
ERCC2-212ENST00000591309 TBC1D13Q9NVG8 400 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 PUF60Q9UHX1 559 aaKnown RBP22.71■■□□□ 1.23
ERCC2-212ENST00000591309 PLAGL2Q9UPG8 496 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 TNFSF13BQ9Y275 285 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 USP20Q9Y2K6 914 aa22.71■■□□□ 1.23
ERCC2-212ENST00000591309 ZC3H11AO75152 810 aaKnown RBP eCLIP22.7■■□□□ 1.22
ERCC2-212ENST00000591309 IDEP14735 1019 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 MATR3P43243 847 aaKnown RBP eCLIP22.7■■□□□ 1.22
ERCC2-212ENST00000591309 NCKAP1LP55160 1127 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 KRT17Q04695 432 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 TIGD5Q53EQ6 642 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 NT5DC1Q5TFE4 455 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 LRRC55Q6ZSA7 311 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 HAUS6Q7Z4H7 955 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 TMEM161BQ8NDZ6 487 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 LEO1Q8WVC0 666 aaPredicted RBP22.7■■□□□ 1.22
ERCC2-212ENST00000591309 RPS6KC1Q96S38 1066 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 TARS2Q9BW92 718 aaKnown RBP22.7■■□□□ 1.22
ERCC2-212ENST00000591309 RNF39Q9H2S5 420 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 HCSTQ9UBK5 93 aa22.7■■□□□ 1.22
ERCC2-212ENST00000591309 A0A087X0B3 334 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 TTLL13PA6NNM8 815 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 FGF18O76093 207 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 CSPG5O95196 566 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 POMCP01189 267 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 ITGB1P05556 798 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 MAPTP10636 758 aaKnown RBP22.69■■□□□ 1.22
ERCC2-212ENST00000591309 GAP43P17677 238 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 AKAP5P24588 427 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 MLH1P40692 756 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 ZNF131P52739 623 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 ZNF568Q3ZCX4 644 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 RESP18Q5W5W9 173 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 EEF1DP3Q658K8 133 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 GAD1Q99259 594 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 ACO2Q99798 780 aaKnown RBP22.69■■□□□ 1.22
ERCC2-212ENST00000591309 SPG21Q9NZD8 308 aa22.69■■□□□ 1.22
ERCC2-212ENST00000591309 MYMKA6NI61 221 aa22.68■■□□□ 1.22
ERCC2-212ENST00000591309 GRM6O15303 877 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms