RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 BLOC1S4Q9NUP1 217 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 THEGQ9P2T0 379 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 USP20Q9Y2K6 914 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 HES2Q9Y543 173 aa10.14□□□□□ -0.79
DNMT1-223ENST00000591239 MYO7AQ13402 2215 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NPHP3-ACAD11A0A0J9YXS1 232 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 K7ERI5 159 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 N4BP3O15049 544 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 SPTLC2O15270 562 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 ZC3H11AO75152 810 aaKnown RBP eCLIP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 CSPG5O95196 566 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NPTXRO95502 500 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 EDN1P05305 212 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 PLS3P13797 630 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 DDIT3P35638 169 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 TXLNAP40222 546 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 ALDH7A1P49419 539 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 BCAR1P56945 870 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 UBE3AQ05086 875 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 RNASELQ05823 741 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 MCM6Q14566 821 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 STK38Q15208 465 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 FOXD4L6Q3SYB3 417 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 FOXD4L3Q6VB84 417 aaPredicted RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 GPBP1Q86WP2 473 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 URGCPQ8TCY9 931 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 ATXN2LQ8WWM7 1075 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 LARP4BQ92615 738 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 RAD54LQ92698 747 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 HLA-CQ95604 372 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NTPCRQ9BSD7 190 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NXF3Q9H4D5 531 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 PDZD7Q9H5P4 517 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NSUN3Q9H649 340 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 NRDE2Q9H7Z3 1164 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 KMT5AQ9NQR1 393 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 SPG21Q9NZD8 308 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 ARHGAP28Q9P2N2 729 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 KANSL3Q9P2N6 904 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 RBM19Q9Y4C8 960 aaKnown RBP10.13□□□□□ -0.79
DNMT1-223ENST00000591239 C5orf42Q9H799 3197 aa10.13□□□□□ -0.79
DNMT1-223ENST00000591239 ARL5CA6NH57 179 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 NT5C1B-RDH14C9J2C7 533 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 SLC16A4O15374 487 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 PPP6R2O75170 966 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 YEATS4O95619 227 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 POMCP01189 267 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 AKAP5P24588 427 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 PPM1AP35813 382 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 SMTNP53814 917 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 MRPS5P82675 430 aaKnown RBP10.12□□□□□ -0.79
DNMT1-223ENST00000591239 PLCB3Q01970 1234 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 TFF2Q03403 129 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 KRT17Q04695 432 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 NT5DC1Q5TFE4 455 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ATF7IP2Q5U623 682 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 RRAGBQ5VZM2 374 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ATL3Q6DD88 541 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 TAS1R3Q7RTX0 852 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ZNF280BQ86YH2 543 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 GAD1Q99259 594 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 REEP2Q9BRK0 252 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ADPGKQ9BRR6 497 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 APOL6Q9BWW8 343 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 GBP3Q9H0R5 595 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 TMEM134Q9H6X4 195 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 LARSQ9P2J5 1176 aaKnown RBP10.12□□□□□ -0.79
DNMT1-223ENST00000591239 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
DNMT1-223ENST00000591239 CCDC39Q9UFE4 941 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 PUF60Q9UHX1 559 aaKnown RBP10.12□□□□□ -0.79
DNMT1-223ENST00000591239 KCNG1Q9UIX4 513 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 ODF2LQ9ULJ1 636 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 COG5Q9UP83 839 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 LZTS1Q9Y250 596 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 GIT1Q9Y2X7 761 aa10.12□□□□□ -0.79
DNMT1-223ENST00000591239 PHLPP2Q6ZVD8 1323 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.11□□□□□ -0.79
DNMT1-223ENST00000591239 CARNS1A5YM72 827 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 INPPL1O15357 1258 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 B4GALT3O60512 393 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 DDHD2O94830 711 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 KRT18P05783 430 aaKnown RBP10.11□□□□□ -0.79
DNMT1-223ENST00000591239 GALTP07902 379 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 IRS1P35568 1242 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 MLH1P40692 756 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 ERVFC1P60507 584 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 GIT2Q14161 759 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 BECN1Q14457 450 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 EEF1DP3Q658K8 133 aa10.11□□□□□ -0.79
DNMT1-223ENST00000591239 SLC39A11Q8N1S5 342 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms