RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 LMO3Q8TAP4 145 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 RIT2Q99578 217 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 PXMP2Q9NR77 195 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 DMAC2Q9NW81 257 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
GFAP-216ENST00000589701 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 APEX2Q9UBZ4 518 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
GFAP-216ENST00000589701 ADGRA3Q8IWK6 1321 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
GFAP-216ENST00000589701 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
GFAP-216ENST00000589701 FLT3P36888 993 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 VAMP7P51809 220 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 MNAT1P51948 309 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 HLTFQ14527 1009 aaKnown RBP eCLIP11.86□□□□□ -0.51
GFAP-216ENST00000589701 SEZ6Q53EL9 994 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 SWSAP1Q6NVH7 229 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 TAF4BQ92750 862 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 ZNF541Q9H0D2 1346 aa11.86□□□□□ -0.51
GFAP-216ENST00000589701 GOLGA6CA6NDK9 693 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 GOLGA6DP0CG33 693 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 PRLRP16471 622 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 DAB2IPQ5VWQ8 1189 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 PCNX4Q63HM2 1172 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 LLGL2Q6P1M3 1020 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 SLC47A2Q86VL8 602 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 USP38Q8NB14 1042 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 ZNF668Q96K58 619 aaPredicted RBP11.85□□□□□ -0.51
GFAP-216ENST00000589701 KIAA1683Q9H0B3 1180 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 LUC7LQ9NQ29 371 aaKnown RBP11.85□□□□□ -0.51
GFAP-216ENST00000589701 GOLGA6AQ9NYA3 693 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 CPSF2Q9P2I0 782 aaKnown RBP11.85□□□□□ -0.51
GFAP-216ENST00000589701 ODF2LQ9ULJ1 636 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 NOC2LQ9Y3T9 749 aaKnown RBP11.85□□□□□ -0.51
GFAP-216ENST00000589701 RPTORQ8N122 1335 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 CYP26A1O43174 497 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 SGPL1O95470 568 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 PAX3P23760 479 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 DCAF12L1Q5VU92 463 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 SLC30A5Q8TAD4 765 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 ZNF483Q8TF39 744 aaPredicted RBP11.85□□□□□ -0.51
GFAP-216ENST00000589701 RRAGCQ9HB90 399 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 PFASO15067 1338 aa11.85□□□□□ -0.51
GFAP-216ENST00000589701 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
GFAP-216ENST00000589701 DENND3A2RUS2 1198 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 NR3C2P08235 984 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 PLS3P13797 630 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 ATP1A2P50993 1020 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 WNT7BP56706 349 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 SP2Q02086 613 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 SNX1Q13596 522 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 TMEM132BQ14DG7 1078 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 FKBP1CQ5VVH2 108 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 STRA6Q9BX79 667 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 DPH5Q9H2P9 285 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 LTBP3Q9NS15 1303 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 GLTPD2A6NH11 291 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 FGGP02679 453 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 KRT13P13646 458 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 PRKCIP41743 596 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 NPTX2P47972 431 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 TNIP1Q15025 636 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 MTMR14Q8NCE2 650 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 FAM71BQ8TC56 605 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 PCDHB18PQ96TA0 734 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 TRIM51Q9BSJ1 452 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 ERVK-5Q9HDB9 667 aa11.84□□□□□ -0.51
GFAP-216ENST00000589701 DICER1Q9UPY3 1922 aaKnown RBP11.84□□□□□ -0.51
GFAP-216ENST00000589701 KRIT1O00522 736 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 TTI1O43156 1089 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 SART1O43290 800 aaKnown RBP11.83□□□□□ -0.51
GFAP-216ENST00000589701 CTNND1O60716 968 aaKnown RBP11.83□□□□□ -0.51
GFAP-216ENST00000589701 CNGA1P29973 690 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 BACE1P56817 501 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 TUBB4BP68371 445 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 SNRNP35Q16560 246 aaKnown RBP11.83□□□□□ -0.51
GFAP-216ENST00000589701 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 NT5DC3Q86UY8 548 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.51
GFAP-216ENST00000589701 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.51
GFAP-216ENST00000589701 ALG3Q92685 438 aa11.83□□□□□ -0.51
GFAP-216ENST00000589701 KRT35Q92764 455 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms