RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 TMC2Q8TDI7 906 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 BAP1Q92560 729 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 SYN2Q92777 582 aaPredicted RBP13.13□□□□□ -0.31
CCBE1-203ENST00000589116 CRACR2AQ9BSW2 395 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 MRPL4Q9BYD3 311 aaKnown RBP13.13□□□□□ -0.31
CCBE1-203ENST00000589116 GCNT4Q9P109 453 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 MYO6Q9UM54 1294 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
CCBE1-203ENST00000589116 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 EXTL3O43909 919 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MSCO60682 206 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CCDC175P0C221 793 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 TRIM49P0CI25 452 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 TRIM49CP0CI26 452 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CYBAP13498 195 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 FLT3LGP49771 235 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CLCN3P51790 818 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 IGBP1P78318 339 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MYL7Q01449 175 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CETN1Q12798 172 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 GRIK4Q16099 956 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MAPK6Q16659 721 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MTHFD1LQ6UB35 978 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 RAD9BQ6WBX8 426 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 SAAL1Q96ER3 474 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PPP1R13BQ96KQ4 1090 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MFSD14AQ96MC6 490 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 KATNAL1Q9BW62 490 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 ARHGAP39Q9C0H5 1083 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PPP2R2CQ9Y2T4 447 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 OFD1O75665 1012 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 TUBB4AP04350 444 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PRKCBP05771 671 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 ADRB2P07550 413 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 SRGAP2CP0DJJ0 459 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 RFX1P22670 979 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PHKA2P46019 1235 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 PTENP60484 403 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 RRAGAQ7L523 313 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 CCDC170Q8IYT3 715 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 TRIB2Q92519 343 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
CCBE1-203ENST00000589116 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
CCBE1-203ENST00000589116 NRCAMQ92823 1304 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 A0A0B4J269 797 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 ZNF233A6NK53 670 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 HAS3O00219 553 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 KPNA6O60684 536 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 TOM1L1O75674 476 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 UCHL3P15374 230 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 SLC9A1P19634 815 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 GTF2H1P32780 548 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 CYLC1P35663 651 aaPredicted RBP13.11□□□□□ -0.31
CCBE1-203ENST00000589116 MNX1P50219 401 aaPredicted RBP13.11□□□□□ -0.31
CCBE1-203ENST00000589116 PRKCZQ05513 592 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 CYP24A1Q07973 514 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 CBWD6Q4V339 395 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 CBWD3Q5JTY5 395 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 CBWD5Q5RIA9 395 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 TOGARAM2Q6ZUX3 1019 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 PARD3BQ8TEW8 1205 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
CCBE1-203ENST00000589116 FZD8Q9H461 694 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 ADGRG1Q9Y653 693 aa13.11□□□□□ -0.31
CCBE1-203ENST00000589116 ACKR2O00590 384 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 NDUFA10O95299 355 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 HOXD10P28358 340 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 MXI1P50539 228 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 DLG4P78352 724 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 CDC42EP1Q00587 391 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 MFSD10Q14728 455 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 MTF1Q14872 753 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 PTPN14Q15678 1187 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 FSCN1Q16658 493 aaKnown RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
CCBE1-203ENST00000589116 C1orf220Q5T0J3 134 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
CCBE1-203ENST00000589116 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms