RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 NIFKQ9BYG3 293 aaKnown RBP8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 TMEM117Q9H0C3 514 aa8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 ELAC1Q9H777 363 aaKnown RBP8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 SH3GLB2Q9NR46 395 aa8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 PDRG1Q9NUG6 133 aa8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 WRAP73Q9P2S5 460 aaPredicted RBP8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 CDV3Q9UKY7 258 aaKnown RBP8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 FAM50BQ9Y247 325 aa8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 GPSM3Q9Y4H4 160 aa8.48□□□□□ -1.05
GPATCH8-206ENST00000588554 A0A087WWV3 80 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 IGKV6-21A0A0C4DH24 114 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 A0A0U1RQF3 1178 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 LOC730098B7Z3J9 87 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 CTDNEP1O95476 244 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 TMOD1P28289 359 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 SFNP31947 248 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 TECP42680 631 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 AFF1P51825 1210 aaKnown RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 JAK3P52333 1124 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 NONOQ15233 471 aaKnown RBP eCLIP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 LETM2Q2VYF4 491 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 XKR3Q5GH77 459 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 ODR4Q5SWX8 454 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 ALYREFQ86V81 257 aaKnown RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 RHPN2Q8IUC4 686 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 BCL7CQ8WUZ0 217 aaPredicted RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 EDAQ92838 391 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 FAM167AQ96KS9 214 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 ZFP42Q96MM3 310 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 MBOAT7Q96N66 472 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 S1PR5Q9H228 398 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 SLKQ9H2G2 1235 aaPredicted RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 SUCLA2Q9P2R7 463 aaPredicted RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 DDX25Q9UHL0 483 aaKnown RBP8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 TPCN1Q9ULQ1 816 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 CEP131Q9UPN4 1083 aa8.47□□□□□ -1.05
GPATCH8-206ENST00000588554 B4GALT3O60512 393 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 MAFO75444 373 aaPredicted RBP8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 DEXIO95424 95 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 LAG3P18627 525 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 CA8P35219 290 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 BCAR1P56945 870 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 PLCB3Q01970 1234 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 UBE3AQ05086 875 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 HERC4Q5GLZ8 1057 aaPredicted RBP8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 SYCE2Q6PIF2 218 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 TMC7Q7Z402 723 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 SLC39A11Q8N1S5 342 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 C12orf76Q8N812 135 aaPredicted RBP8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 NECAB1Q8N987 351 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 DAGLBQ8NCG7 672 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 HAS1Q92839 578 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 PPP2R3CQ969Q6 453 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 TMEM143Q96AN5 459 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 FBXL18Q96ME1 805 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 NLRP4Q96MN2 994 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 ZNF558Q96NG5 402 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 PHF20Q9BVI0 1012 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 ENTPD7Q9NQZ7 604 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 SPG21Q9NZD8 308 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 RGL1Q9NZL6 768 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 VAV3Q9UKW4 847 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 INPP5FQ9Y2H2 1132 aa8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 MYH9P35579 1960 aaKnown RBP8.46□□□□□ -1.06
GPATCH8-206ENST00000588554 WDR81Q562E7 1941 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CCNT1O60563 726 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CLASP2O75122 1294 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 OFD1O75665 1012 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 WFS1O76024 890 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 LARGE1O95461 756 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CXCL14O95715 111 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 SRGAP2CP0DJJ0 459 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 FDPSP14324 419 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 PHKA2P46019 1235 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 PSMC5P62195 406 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 ZXDAP98168 799 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 KRT17Q04695 432 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CTTNQ14247 550 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CBX2Q14781 532 aaPredicted RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 ANKRD54Q6NXT1 300 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 PIK3AP1Q6ZUJ8 805 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 CCDC116Q8IYX3 515 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 LRRC43Q8N309 656 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 MRPL43Q8N983 215 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 PRPF31Q8WWY3 499 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 SUSD6Q92537 303 aa8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 PHF7Q9BWX1 381 aaPredicted RBP8.45□□□□□ -1.06
GPATCH8-206ENST00000588554 VN1R3Q9BXE9 311 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms