RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 CSPG5O95196 566 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 PLS3P13797 630 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 ALDH7A1P49419 539 aaKnown RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 PKP1Q13835 747 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 MCM6Q14566 821 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 RRAGBQ5VZM2 374 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 ATL3Q6DD88 541 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 KCNT2Q6UVM3 1135 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 LRRC55Q6ZSA7 311 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 USP49Q70CQ1 688 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 SMG8Q8ND04 991 aaKnown RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 FAM193BQ96PV7 902 aaPredicted RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 NSUN3Q9H649 340 aaKnown RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 TBC1D13Q9NVG8 400 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 LARSQ9P2J5 1176 aaKnown RBP15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 STK17AQ9UEE5 414 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 CFAP45Q9UL16 551 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 ODF2LQ9ULJ1 636 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 PLXNA4Q9HCM2 1894 aa15.23■□□□□ 0.03
AC003043.1-201ENST00000588260 NPHP3-ACAD11A0A0J9YXS1 232 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 H0YCG3 227 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 SLC16A4O15374 487 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 ZC3H11AO75152 810 aaKnown RBP eCLIP15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 PPP6R2O75170 966 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 TBCAO75347 108 aaKnown RBP15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 FAM13AO94988 1023 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 DDIT3P35638 169 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 KRT17Q04695 432 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 UBE3AQ05086 875 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 STRN3Q13033 797 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 SPPL3Q8TCT6 385 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 POF1BQ8WVV4 589 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 PPP2R3CQ969Q6 453 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 NXF3Q9H4D5 531 aaKnown RBP15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 PDZD7Q9H5P4 517 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 TMEM134Q9H6X4 195 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 PRDM6Q9NQX0 595 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 SPG21Q9NZD8 308 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 COG5Q9UP83 839 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 HES2Q9Y543 173 aa15.22■□□□□ 0.03
AC003043.1-201ENST00000588260 CUTAO60888 179 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 PBX3P40426 434 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 STAT6P42226 847 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 BCAR1P56945 870 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 DCAF4L1Q3SXM0 396 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 ARSHQ5FYA8 562 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 MICAL1Q8TDZ2 1067 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 HLA-CQ95604 372 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 REEP2Q9BRK0 252 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 MRPL4Q9BYD3 311 aaKnown RBP15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 ARHGAP28Q9P2N2 729 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 PARP2Q9UGN5 583 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 GIT1Q9Y2X7 761 aa15.21■□□□□ 0.03
AC003043.1-201ENST00000588260 ATG2AQ2TAZ0 1938 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 ARL5CA6NH57 179 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 POMCP01189 267 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 MLH1P40692 756 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 ME1P48163 572 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 PLCB3Q01970 1234 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 AAK1Q2M2I8 961 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 LRRC15Q8TF66 581 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 TMEM169Q96HH4 297 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 RPS6KC1Q96S38 1066 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 GAD1Q99259 594 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 NTPCRQ9BSD7 190 aaKnown RBP15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 PARVGQ9HBI0 331 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 TLR9Q9NR96 1032 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 LZTS1Q9Y250 596 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 USP20Q9Y2K6 914 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 ATP6V1DQ9Y5K8 247 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
AC003043.1-201ENST00000588260 TDRD15B5MCY1 1934 aaKnown RBP15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 NCK2O43639 380 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 BRD1O95696 1058 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 SCP2P22307 547 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 AKAP5P24588 427 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 DNAJB1P25685 340 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 MRPS5P82675 430 aaKnown RBP15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 DNM1Q05193 864 aaKnown RBP15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 GIT2Q14161 759 aa15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 BMS1Q14692 1282 aaKnown RBP15.19■□□□□ 0.02
AC003043.1-201ENST00000588260 NT5DC1Q5TFE4 455 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms