RNA–Protein interactions for RNA: ENST00000588066.5

NEDD4L-221, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-221ENST00000588066 PLCB4Q15147 1175 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 SLC18A3Q16572 532 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 WHAMMP3Q1A5X7 153 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 KRT39Q6A163 491 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 IQCEQ6IPM2 695 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 RGMBQ6NW40 437 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 ENOSF1Q7L5Y1 443 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 TRIM58Q8NG06 486 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 PPTC7Q8NI37 304 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 ASAP3Q8TDY4 903 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 FNBP1Q96RU3 617 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 MRPL4Q9BYD3 311 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 ZFYVE28Q9HCC9 887 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 TMEM8AQ9HCN3 771 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 SIX2Q9NPC8 291 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 CDC23Q9UJX2 597 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 AGO2Q9UKV8 859 aaKnown RBP9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 PLXNB2O15031 1838 aa9.54□□□□□ -0.88
NEDD4L-221ENST00000588066 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 IGKV6-21A0A0C4DH24 114 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 GOLGA8IPA6NC78 632 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 GOLGA8JA6NMD2 632 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 TRIM49P0CI25 452 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 TRIM49CP0CI26 452 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 ACTN1P12814 892 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 MFAP3P55082 362 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 JAM2P57087 298 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 POU5F1BQ06416 359 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 CYP24A1Q07973 514 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 MAP2K5Q13163 448 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 PSMD6Q15008 389 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 MAPK6Q16659 721 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 ASTE1Q2TB18 679 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 HSDL1Q3SXM5 330 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 DUSP28Q4G0W2 176 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 HGSNATQ68CP4 663 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 TAPT1Q6NXT6 567 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 APBB1IPQ7Z5R6 666 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 ZNF526Q8TF50 670 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 PRPF31Q8WWY3 499 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 UBXN4Q92575 508 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 MAML3Q96JK9 1138 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 NT5C1BQ96P26 610 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 NOX5Q96PH1 765 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 WDR24Q96S15 920 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 MAP7D2Q96T17 732 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 IKZF4Q9H2S9 585 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 SUGCTQ9HAC7 445 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 SUCLA2Q9P2R7 463 aaPredicted RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 INTUQ9ULD6 942 aa9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 REXO2Q9Y3B8 237 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-221ENST00000588066 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 RRN3P2A6NIE6 340 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 BTNL10A8MVZ5 291 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 EFCAB8A8MWE9 144 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 TLR2O60603 784 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 LGALS2P05162 132 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 TNFAIP3P21580 790 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 MARK3P27448 753 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 ADSSP30520 456 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 RGS2P41220 211 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 PHKA2P46019 1235 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 GCLMP48507 274 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 NAP1L1P55209 391 aaKnown RBP9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 SOX10P56693 466 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CDC42EP1Q00587 391 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 ARID5AQ03989 594 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 LAMTOR4Q0VGL1 99 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 GRM1Q13255 1194 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 ACVR2BQ13705 512 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CAPSQ13938 189 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 DRAP1Q14919 205 aaPredicted RBP9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 KYAT1Q16773 422 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CBWD6Q4V339 395 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 EPC2Q52LR7 807 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 WDR44Q5JSH3 913 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CBWD3Q5JTY5 395 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CBWD5Q5RIA9 395 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CST9Q5W186 159 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 DPY19L2P1Q6NXN4 242 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 IRF2BP2Q7Z5L9 587 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 CBWD2Q8IUF1 395 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 FBXL13Q8NEE6 735 aa9.52□□□□□ -0.89
NEDD4L-221ENST00000588066 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms