RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 BECN1Q14457 450 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 SMC1AQ14683 1233 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 UBXN11Q5T124 520 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 C1orf186Q6ZWK4 172 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 SLC39A11Q8N1S5 342 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 KRI1Q8N9T8 703 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 TCF25Q9BQ70 676 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 CCSER1Q9C0I3 900 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 GBP3Q9H0R5 595 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 CLDND1Q9NY35 253 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 SRPRBQ9Y5M8 271 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 UNC80Q8N2C7 3258 aa12.91□□□□□ -0.34
PRKCSH-206ENST00000587509 DLL1O00548 723 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 INPPL1O15357 1258 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 FAM13AO94988 1023 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PLS3P13797 630 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PLCG1P19174 1290 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 CA8P35219 290 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 NPTX2P47972 431 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 NDUFV1P49821 464 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 SLC12A3P55017 1021 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 GRIK3Q13003 919 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 LONRF3Q496Y0 759 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 AGMOQ6ZNB7 445 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 CCDC73Q6ZRK6 1079 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 TMC7Q7Z402 723 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 GPBP1Q86WP2 473 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 BSNDQ8WZ55 320 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 EIF2AQ9BY44 585 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 NXF3Q9H4D5 531 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PRDM6Q9NQX0 595 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 TOPORSQ9NS56 1045 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 PARP2Q9UGN5 583 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 CLIC4Q9Y696 253 aa12.9□□□□□ -0.34
PRKCSH-206ENST00000587509 ARL5CA6NH57 179 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 YEATS4O95619 227 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ZSCAN22P10073 491 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 MARCKSP29966 332 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 NASPP49321 788 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 SLC39A14Q15043 492 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 KARSQ15046 597 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 PTPAQ15257 358 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ZNF568Q3ZCX4 644 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 LRRC55Q6ZSA7 311 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 SMG8Q8ND04 991 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 RAD54LQ92698 747 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 UHRF1Q96T88 793 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 PLIN2Q99541 437 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 TLE6Q9H808 572 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 PARVGQ9HBI0 331 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ARHGAP28Q9P2N2 729 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 HCSTQ9UBK5 93 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 SSX2IPQ9Y2D8 614 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
PRKCSH-206ENST00000587509 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 F13A1P00488 732 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 POMCP01189 267 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 ALDH2P05091 517 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 PBX3P40426 434 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 STAT6P42226 847 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 NRIP1P48552 1158 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 TFF2Q03403 129 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 RAD51AP2Q09MP3 1159 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 HYAL1Q12794 435 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 COL19A1Q14993 1142 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 RRAGBQ5VZM2 374 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 BICD1Q96G01 975 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 IGSF21Q96ID5 467 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 GAD1Q99259 594 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 PYM1Q9BRP8 204 aaKnown RBP12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 LRRC27Q9C0I9 530 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 NRDE2Q9H7Z3 1164 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
PRKCSH-206ENST00000587509 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms