RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MFSD14AQ96MC6 490 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 NLRP4Q96MN2 994 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 EIF3CQ99613 913 aaKnown RBP21.58■■□□□ 1.04
TRIM47-204ENST00000587339 DEF6Q9H4E7 631 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 AGO2Q9UKV8 859 aaKnown RBP21.58■■□□□ 1.04
TRIM47-204ENST00000587339 A6NJR5 290 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 ZNF233A6NK53 670 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 ASAP2O43150 1006 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 EXTL3O43909 919 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 GJB1P08034 283 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MAPK6Q16659 721 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 TDRD12Q587J7 1177 aaKnown RBP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 ZPBP2Q6X784 338 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 GPIHBP1Q8IV16 184 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 TMC2Q8TDI7 906 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 INTS2Q9H0H0 1204 aaKnown RBP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 CCDC113Q9H0I3 377 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 AIPL1Q9NZN9 384 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 ANKFY1Q9P2R3 1169 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MYO6Q9UM54 1294 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 REXO2Q9Y3B8 237 aaKnown RBP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 SIP14410 1827 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MSCO60682 206 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 SERPING1P05155 500 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 EIF4A3P38919 411 aaKnown RBP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MATR3P43243 847 aaKnown RBP eCLIP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MXI1P50539 228 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 FCGRTP55899 365 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 CYP24A1Q07973 514 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 ARHGAP29Q52LW3 1261 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 HGSNATQ68CP4 663 aa21.57■■□□□ 1.04
TRIM47-204ENST00000587339 MRPL4Q9BYD3 311 aaKnown RBP21.57■■□□□ 1.04
TRIM47-204ENST00000587339 A0A0U1RQJ8 604 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 EDN1P05305 212 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 TMOD1P28289 359 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 PSMC4P43686 418 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 PPFIA1Q13136 1202 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 HSP90AA2PQ14568 343 aaPredicted RBP21.56■■□□□ 1.04
TRIM47-204ENST00000587339 ATRIPQ8WXE1 791 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 ZBTB45Q96K62 511 aaPredicted RBP21.56■■□□□ 1.04
TRIM47-204ENST00000587339 APEX2Q9UBZ4 518 aa21.56■■□□□ 1.04
TRIM47-204ENST00000587339 A0A0B4J269 797 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 SSU72P8A0A1W2PR75 194 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 PMM2O15305 246 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 AKR1B10O60218 316 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 LDHAP00338 332 aaKnown RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 IGHA2P01877 340 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 PRKCBP05771 671 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 KIF11P52732 1056 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 ARID5AQ03989 594 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 ENPEPQ07075 957 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 SPA17Q15506 151 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 GJB7Q6PEY0 223 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 EHBP1Q8NDI1 1231 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 LMO3Q8TAP4 145 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 LENG1Q96BZ8 264 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 MSTO1Q9BUK6 570 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 HAPLN2Q9GZV7 340 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 TMEM117Q9H0C3 514 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 DNAI1Q9UI46 699 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 CLDN3O15551 220 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 LACTBP83111 547 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 MAPK8IP2Q13387 824 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 GRIK4Q16099 956 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 ASIC2Q16515 512 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 MTHFD1LQ6UB35 978 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 ZNF668Q96K58 619 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 POP1Q99575 1024 aaKnown RBP21.55■■□□□ 1.04
TRIM47-204ENST00000587339 DAAM1Q9Y4D1 1078 aa21.55■■□□□ 1.04
TRIM47-204ENST00000587339 INO80B-WBP1J3KQ70 363 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 AOC2O75106 756 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 TOM1L1O75674 476 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 DLATP10515 647 aaKnown RBP21.54■■□□□ 1.04
TRIM47-204ENST00000587339 ACOT2P49753 483 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 JAM2P57087 298 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 NLRP11P59045 1033 aaKnown RBP21.54■■□□□ 1.04
TRIM47-204ENST00000587339 PTENP60484 403 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 GNG11P61952 73 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 KLHL30Q0D2K2 578 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 DEFB115Q30KQ5 88 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 EPC2Q52LR7 807 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 KRT39Q6A163 491 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 LINC01465Q8N7H1 131 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 INO80BQ9C086 356 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-204ENST00000587339 ARHGAP39Q9C0H5 1083 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 TMEM8AQ9HCN3 771 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 AJAP1Q9UKB5 411 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-204ENST00000587339 AKT3Q9Y243 479 aa21.54■■□□□ 1.04
TRIM47-204ENST00000587339 TTLL13PA6NNM8 815 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 GTF2H1P32780 548 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 CPT1AP50416 773 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 CYP27A1Q02318 531 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 KIAA1328Q86T90 577 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 TCHPQ9BT92 498 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 NFKBIZQ9BYH8 718 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 DNAJC12Q9UKB3 198 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 Q9Y3F1 56 aa21.53■■□□□ 1.04
TRIM47-204ENST00000587339 KIF5CO60282 957 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms